Tarenaya hassleriana (spider flower): 104817284
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Entry
104817284 CDS
T04125
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 8 isoform X1
KO
K12614
ATP-dependent RNA helicase DDX6/DHH1 [EC:
5.6.2.7
]
Organism
thj
Tarenaya hassleriana (spider flower)
Pathway
thj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
thj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104817284
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
thj03019
]
104817284
03036 Chromosome and associated proteins [BR:
thj03036
]
104817284
Enzymes [BR:
thj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
104817284
Messenger RNA biogenesis [BR:
thj03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
104817284
mRNA degradation factors
5'-3' decay
Decapping complex
104817284
Chromosome and associated proteins [BR:
thj03036
]
Eukaryotic type
Gene silencing
piRNA pathway
104817284
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CMS1
Motif
Other DBs
NCBI-GeneID:
104817284
NCBI-ProteinID:
XP_010544718
LinkDB
All DBs
Position
Unknown
AA seq
474 aa
AA seq
DB search
MNSRGRYPSGVEAGRGTASRSRGQRQQPQQYAQRGYAQVPQQQRQWTRVARLPGNASEVD
VDNVEKTVHSDDSDTTSQDLRPPPPDTRHRTEDVTTTKGNDFEDYFLKRELLMGIYEKGF
QKPSPVQEESIPIALTGSDILARSKNGTGKTAAFCIPALEKIDPDNNVIQAVILVPTREL
ALQTSQVCKELGKHLKIQVMVTTGGTSLRDDIMRLYQTVHLLVATPGRILDLAKKGVCAL
EDCAMFVLDEADKLLSAEIQPSIEQLIQFLPENRQILLFSATFPLTMKDFTKRYLRKPYV
INLMNELPLKGVTQYYAYVEERQKVHCLCTLFSKLQINQSIVFCNSVARVELLAKKITEL
GYSCFYIHSNMLQDHRNRVFHDFRNGACRNLVCTDLCTRGIDIQSVNVVINFDFPKSTET
YLHRIGRSGRFGHLGLAVNLITSKDRFKLYRTEQELGAEIKPIPVSIDQAIYCR
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgaatagcagaggacggtatccatctggggttgaagcgggacgtggaacagcgtctcgg
tcgagaggtcagcggcagcagcctcaacagtacgctcagcgagggtacgcacaggtgccc
caacagcagcggcagtggaccagagtcgctcggcttcctggaaacgccagcgaagttgat
gttgacaatgtcgagaagacggttcattccgacgacagtgatactactagccaggactta
aggccgccacctccagatactcgtcataggacagaggacgtgacaaccaccaagggaaat
gactttgaagattactttttgaaaagagagttgctcatgggaatatatgagaaaggtttt
caaaagccgtctcctgtacaggaagaaagcattccaattgccttgaccggcagcgatatt
cttgctagatccaaaaatgggacaggaaagactgctgcattttgcattccggccctcgag
aaaattgatcctgataacaatgtcatccaagctgtgatcctggtcccgacccgcgagttg
gcccttcagacatcacaggtttgcaaggagcttggcaagcatttgaagatacaggttatg
gtcaccactggcggtaccagtttgagagatgatatcatgcgattatatcaaactgttcat
ctgcttgttgcaactcctggaagaatcttagatctggctaaaaagggcgtttgcgccttg
gaagattgtgcaatgtttgtactggatgaggccgacaagcttttgtctgcagagattcaa
ccttcaatagagcaattgatacagttcctgccagaaaatcgccagattctgttgttttca
gctacattccctctgaccatgaaggactttacgaagagatatctgcggaagccctacgtt
attaatctcatgaatgaactcccactaaagggtgtcacgcaatattatgcttatgttgaa
gaaaggcagaaggtgcactgcctatgcactcttttctctaagctgcaaataaatcaatca
atcgtcttttgcaactctgtcgctcgggtggagctgttggccaagaaaatcacagaacta
ggctattcatgtttctatattcactcaaatatgcttcaagaccatcggaacagggtgttc
catgatttccgcaatggtgcatgcagaaatcttgtctgcactgatctgtgtacgcgtgga
atcgatatccaatctgtgaatgtggttattaactttgattttccgaagagcacagaaacg
tatctgcacaggataggtagatcaggaaggtttggacacctggggcttgcggtgaatttg
ataacatccaaggaccgattcaagttgtataggacggagcaagaacttggagcagagatc
aagccaattcctgttagtattgatcaggcaatctattgccggtaa
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integrated database retrieval system
