Tarenaya hassleriana (spider flower): 104817461
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Entry
104817461 CDS
T04125
Name
(RefSeq) PH-interacting protein
KO
K11797
PH-interacting protein
Organism
thj
Tarenaya hassleriana (spider flower)
Brite
KEGG Orthology (KO) [BR:
thj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
thj04121
]
104817461
Ubiquitin system [BR:
thj04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
104817461
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_WDR75_1st
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_SCAP
Beta-prop_EML
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_C
Bromodomain
Beta-prop_IFT122_1st
NBCH_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_DCAF4
Beta-prop_EIPR1
WD40_MABP1-WDR62_1st
VPS8_N
Beta-prop_HPS5
Auxin_resp
WD_LRWD1
Beta-prop_IP5PC_F
WDR90_beta-prop_4th
Motif
Other DBs
NCBI-GeneID:
104817461
NCBI-ProteinID:
XP_010544972
LinkDB
All DBs
Position
Unknown
AA seq
1589 aa
AA seq
DB search
MEWIHKASLCKATSNLTDVAQDNIPFDQQERLAGHASLNNVDIDLREVYFLILHFLSTGP
CKRTLGHLRDELLENQLLPRRYHSRCSRSGTYSGHADDDGISLPLSYGNLEERYPHIEKD
HLVKLLKQLILNSSSPLHERVEGNAPNAADVPTLLGCGSFSLLDHDKIMENQQARRVASY
LRWPHIQADQVRGLSLREIGGGFTKHHRAPSIRSACYAIARPSMIVQKMQNVKKLRGHRN
AVYCAIFDRAGRYVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNSALVASAS
NDFVIRVWRLPDGMPISVLRGHTGAVTAIAFSPRPASVYQLLSSSDDGTCRIWDARYSQC
IPRIYIPNRSDAITGKSNSAPTNVASASIASQSHQILCCAYNANGTVFVTGSSDSNARVW
SAIKPNADESEQPMHELDVLCGHENDVNYVQFSGCAVAPRSSISDSLKEDSFPKFKNSWF
CHDNIVTCSRDGSAIIWTPRSRKSHGKSGRWSKAYHLKVPPPPLPPQPPRGGPRQRFLPT
PRGVNMIIWSLDNRFVLAAIMDCRICVWNAADGSLVHCLTGHTESSYVLDVHPFNPRIAM
SAGYDGRTIIWDIWEGIPIKIYEIGRFKLVDGKFSQDGTSIVLSDEVGQIYFLNTGQGES
QKDAKYDQFFLGDYRPLIRDTNGNVLDQESQLVPHRRNLQDPLCDSSMIPYPEPYQTMYQ
QRRLGALGLEWRPPVIKFAVGPDFSLGEDYIMPPLADLDRMIEPLPEFIDAMYWEPEIEV
LSDDNDSEYNAEEISAGGVRGGLCSSSSDDLECSSEDSDAEHIHSDSNHRKRRTKHLKVE
AASSSGRRANKRILEESDGLTSMNKRTKSGRIGLKGSKRKISDVKALRPQRAAAQNARSL
LSKISGSSSDEVDEDDLNDSSNSESVPRNLQIRGSESDRSFTAVHQVANSSDMLDPQSNG
MPKKKLILKISVKKPARTEENKQDGIISQTAFEQLTFQSSEDNRRVSAIEIYSKEPGSNS
VDANGNSQDMPDFMKSCQRENVENQLYESLDLEHNVTRGKEEMLVSESTETAWEESRSNS
KRDEDALSVEALSNQLINGPDGTGNAEESNEILPKKVRKLRLKLKRPNSPSADDFTDRGC
GSTDVNPSSMNQIIVSEMSHDREASGSEPVISGNMYNVLDSPAPEFEYGEAAVDAIRRKR
SMKMKATSSESITRNNILRVRLGSGAMEMVKKQHNSYTRATDRVPLEEWPSSSTRSRSAR
SSKNSYSTCKKSVIAGSELSNVPRKLSWLMLSEHEEGFRYIPQLGDEVVYFKQGHKEFLV
SRDSTDRDHSRLLPRNLGAVEICKVEKLDYDTYPGSGEGCCKLTLRLLGLLPRVSRQEIQ
LTLPDLIDFPDFIVEKARYDAAIRRNWGTGDRCLVWWRNETGEGGTWWEGRIQSSQAKSD
EFPDSPWETYKVNYETGDTNLHSPWEFYDPQCPWENSTIDEEIRDKLLSRFAGLEKSASR
HQDNYGIQKLNEAAQKMDFCNRFPVPLYPELIRQRLENRYYRSIDAFKHDVDVMLSNAES
YFSRNTQLLSKTRRFRDWFTRTLDKVVDS
NT seq
4770 nt
NT seq
+upstream
nt +downstream
nt
atggagtggatacacaaagcttctctttgtaaggcaacttcaaatctgacagatgtggct
caggataacatcccttttgaccagcaggagagactcgctggtcatgcttctctgaacaat
gtagatattgatcttagagaagtctacttcctgattttgcattttctttctaccgggccc
tgcaaacgaaccttaggtcacttgagagatgagcttttggaaaaccagcttttacctcgt
agatatcattctcggtgctcaagaagtggcacttatagcgggcatgctgatgatgatggt
atttccctcccattaagttatggaaacttggaagagaggtaccctcatatcgagaaggat
cacttggtgaagcttctcaagcaactcattctaaattcttcttctcctctgcacgagaga
gttgaaggaaatgctccaaatgctgctgatgttccaacgctattgggatgtggctctttt
tcacttttggatcatgataaaattatggaaaatcaacaagctaggcgtgttgcctcatac
ttacgctggccgcatatccaagctgatcaagtacgtgggttaagtctaagagaaattgga
ggaggtttcacaaaacaccaccgtgctccatccatccgttcagcatgttatgctattgct
agaccatcaatgattgttcaaaagatgcaaaatgtaaagaagctgaggggccatcgtaat
gctgtttactgtgctatatttgatcgcgctgggaggtatgttatcactggttctgatgac
cggctcgtcaaaatctggtcaatggaaactgcgttttgtttggctagctgtcgcggccac
gaaggtgacataacagacttggctgtgagttcgaacagcgctttggtggcatctgcttca
aatgattttgtgattcgagtttggcgattgcctgatggaatgccaatttctgtgttgcgg
gggcatactggggctgtcactgctattgcctttagtccaagacctgcatcggtttaccaa
cttttatcgtcatcagatgatggaacttgtcgtatatgggatgctaggtactctcaatgc
attccacggatatatataccaaaccgatcagatgctatcaccggtaaaagcaattctgct
ccaactaatgtggcatcagcaagcattgcatctcaaagtcatcaaattctatgttgtgcc
tacaatgccaatgggactgttttcgtcactgggagctctgacagcaatgcaagggtttgg
agtgccataaaacctaatgcagatgagagcgaacaaccgatgcatgagctggatgttctg
tgcgggcatgagaatgatgtcaactatgttcaatttagtggatgtgctgtggctccaaga
tcttcaatatctgactctctgaaagaagacagttttccaaaatttaagaattcttggttt
tgtcatgacaacatagtcacctgttctcgtgacggtagtgcaattatatggactccaaga
tcacgtaaatctcacgggaaatctggacgctggtcgaaagcatatcatctgaaggttcca
ccacctccacttcctcctcaacctccccgaggaggcccacgccaaagatttcttccaaca
cctcggggtgtgaatatgatcatttggagcttggacaatcgttttgtactcgcagccatc
atggattgcaggatatgtgtttggaatgctgctgatggtagcttggtgcattgtttaact
ggtcacacggaatcgtcttatgtcttggatgttcatccttttaatcctcggatagctatg
agcgctggctacgatggaagaacaataatctgggatatatgggagggtatacccatcaaa
atatatgaaatcgggcgattcaagttggttgatgggaagttttcacaagatgggacatct
atagtgctctcggatgaagttggccagatatattttctaaacacgggacaaggagagtct
caaaaggatgccaaatatgaccagtttttccttggtgattatcgtcctcttattcgggat
acaaacggaaatgttcttgaccaggagagtcaacttgttccccaccgaaggaaccttcag
gatcctctttgtgactcaagtatgattccttatccggagccataccagacaatgtatcag
caacgtagacttggtgccttgggcctggaatggcgtcctcctgtgataaaatttgctgtt
ggtcctgacttcagtttaggcgaagattatattatgcctcctttggcagatctagacaga
atgatagagccgttgcccgagtttatagatgctatgtactgggaaccagaaattgaagtt
ctgagtgatgataatgattcagaatacaatgctgaagaaatttctgctggtggagttaga
ggaggcttgtgttccagctcttctgatgatcttgagtgcagctccgaggatagtgatgcc
gaacatatccatagtgatagcaaccaccggaaaagaagaaccaaacatctaaaagttgag
gctgctagttcatctggaaggcgcgccaataagaggattttggaggagagtgatggtttg
acatctatgaataagagaaccaagagtggaagaattggccttaagggttcaaagaggaaa
atctctgatgtaaaggcattgaggccacaaagagctgcagcccagaatgctcgatccttg
ctttctaaaatttctggtagctcttcagatgaagttgatgaggatgacttaaatgattca
tcaaacagtgaatccgttcctcgaaacctacagattcgaggctctgaatctgatagaagt
tttactgctgtgcaccaggtggcaaattcatctgatatgttggaccctcagtcaaatggc
atgccgaagaaaaaattaattctaaagatctcggttaagaagccagcgaggaccgaggaa
aacaaacaggatggtattattagccagactgcttttgagcaactgacttttcaatcttct
gaggacaatcgcagagttagtgctatagaaatctattccaaagaaccagggtcaaattct
gtagatgcaaacggtaactctcaggatatgcctgatttcatgaaatcttgtcagagagaa
aatgttgagaatcagttgtacgagtctttggatctggagcataatgtgacaagggggaaa
gaagaaatgcttgtttctgaatccactgaaactgcttgggaggaaagccgaagcaattct
aagagggatgaagatgcactgagtgttgaagcgttgtctaatcagttgattaatgggcct
gatggtacaggtaatgccgaggaaagcaatgagattcttccaaagaaggtccggaagttg
aggttaaagcttaagcggcctaacagtccttcggcagatgatttcacagatcgcggatgt
ggatctacagatgtaaatccgtcgtccatgaatcagattatagtctcagaaatgtcccat
gaccgggaggcttcaggttctgaaccagtgatcagtggaaacatgtacaatgttttggat
tctcctgcaccagaatttgagtatggagaagctgcagttgatgctatacgtcggaaaagg
tcaatgaaaatgaaggcaacatcaagtgaatcaattacgagaaataacatattacgagtg
aggttgggttccggagccatggagatggtaaagaaacaacacaattcttacacaagagca
actgaccgcgtgccacttgaagaatggccttcaagttcaaccagatcacgatctgcaaga
agcagcaagaacagctacagcacctgtaagaaaagtgttattgctgggagtgagttgagt
aatgtgccgagaaaattatcgtggttgatgttgtcagaacatgaggaaggcttccgttat
atacctcagctcggtgatgaagttgtttacttcaaacagggtcacaaagagtttctagta
tccagagattcaaccgatagggaccattcgaggttgcttcctcgaaacctgggagctgtt
gagatttgcaaggttgagaaactcgactatgacacctatcctggttctggtgagggctgc
tgcaaattgactctccgacttctgggtcttttaccccgagtttcccgccaagaaatccaa
ttgaccctgcccgatcttatcgacttccccgattttattgtggagaaggctcggtatgat
gctgcgataagaagaaactggggaaccggggatagatgcctagtgtggtggagaaacgaa
actggtgagggtggtacatggtgggaaggtagaattcagtcttctcaggccaaatctgat
gaatttcccgatagtccgtgggaaacatacaaagtgaactatgaaactggggacacaaat
ctccacagtccatgggagttttacgatccccaatgtccttgggagaactctactatcgat
gaagaaatcagagacaagctactttctcgatttgctggactagagaagtcggccagccga
caccaggataattatggaatacaaaagctgaatgaagctgcccagaagatggacttctgc
aataggttcccggttcctttatacccggaactgatccggcagaggctagagaaccgttac
tacagaagcattgatgcctttaagcatgatgtggacgtaatgctctccaacgctgaatcc
tacttctccagaaacacacagctgctatccaagactagacgttttcgagattggttcact
cgaacgcttgataaggttgtggacagctga
DBGET
integrated database retrieval system