Tarenaya hassleriana (spider flower): 104817526
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Entry
104817526 CDS
T04125
Name
(RefSeq) protein TRANSPORT INHIBITOR RESPONSE 1-like
KO
K14485
transport inhibitor response 1
Organism
thj
Tarenaya hassleriana (spider flower)
Pathway
thj04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
thj00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
104817526
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
thj04121
]
104817526
Ubiquitin system [BR:
thj04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
104817526
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_At5g56370
LRR_4
F-box-like
F-box
LRR_At1g61320_AtMIF1
Motif
Other DBs
NCBI-GeneID:
104817526
NCBI-ProteinID:
XP_010545044
LinkDB
All DBs
Position
Unknown
AA seq
590 aa
AA seq
DB search
MQKRLALSFPEEVLEHVFSFIQTDKDRNSVSLVCKSWYEIERWCRRKVFVGNCYAVGPAT
VIRRFPEVRSVELKGKPHFADFNLVPDGWGAYVHPWIDAMSTAYMWLEEIRLKRMVVTDE
CLEHIAKSFKNFKVLVLSSCEGFSTDGLAAIASNCRNLRELDLRESDVEDVSGHWLSHFP
DSYTSLVSLNISCLSSEVSFSALERLVSRCPNLMSLRLNRSVPLERLATLLQRAPQLIEL
GTGAYTAEVRPDVFSSLSGAFAGCKGLKSLSGFWDVDPAYLPAMYSACSRLTTLNLSYAT
VQSSDLVKLLSQCPKLQRLWVLDYIEDAGLEALASSCKDLQELRVFPSEPFVMEPNVSLT
EQGLVCVSEGCPKLESVLYFCHQMTNAALITIARNRPNLTRFRLCIIEPKTPDYMTLQPL
DVGFGAIAEHCKELRRLSLSGLLTDKVFEYIGTYAKKLEMLSVAFAGDSDLGLHHVLSGC
DSLRKLEIRDCPFGDKVLLANAPKLETMRSLWMSSCSVSFGACKLLGLKMPRLNVEVIDE
RGPPDSRPDSCPVERVYIYRTVAGPRFDMPGFVWNMDEDSSMRFSRQIVT
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atgcagaagaggttggccttgtcgtttcctgaagaggtgctggagcacgtcttctcgttc
atacagaccgacaaggaccggaactcggtgtctcttgtctgcaagtcgtggtacgagatc
gaacgatggtgccgcaggaaggtctttgtcgggaactgttatgccgtcggacccgcgacg
gtgatccgacggtttccggaggtgagatccgtggagctgaagggaaaaccacacttcgcc
gactttaatctggtgcctgacggctggggagcgtacgtacacccttggattgatgcgatg
tcgacggcgtacatgtggctcgaggagataaggctgaaaaggatggtggtcactgacgag
tgcctggagcacatcgctaagtcctttaagaacttcaaggttctcgtgctttcttcctgc
gaggggttctccaccgatggtctcgccgccatcgcttccaattgcagaaatctgagagag
cttgatttgcgggagagtgatgtggaagatgttagtggccattggctcagtcatttccca
gattcgtacacatcattggtgtcccttaacatctcatgcttatcatctgaggtaagcttt
tctgctttggagcgtctggtgagtaggtgtcccaacctgatgtctctccgcctcaaccgg
tccgtccctcttgaaagacttgcgaccttacttcagagagcaccgcaattgattgagctg
ggcactggcgcttacacggctgaagtgcggcctgatgttttttcaagtttatctggtgct
ttcgctggttgtaaagggctgaagagcttgtctgggttttgggatgttgaccctgcgtat
ctcccagcaatgtattctgcttgcagtagacttacgacattgaacctgagttacgcgact
gttcagagctctgatcttgtcaagcttctcagtcaatgtccgaaattacagcgcctttgg
gtattggattacattgaagatgctggtcttgaggccctagcatccagctgcaaggaccta
caggaattgagagtgtttccatcggagccgtttgtcatggaaccaaatgtgtcattgaca
gaacaagggcttgtctgtgtttccgaaggctgtccaaaactcgaatcagttctctatttc
tgccatcaaatgacaaatgctgctttaatcactatagccaggaaccggcccaacttgact
cgtttccgtttatgcatcattgagccaaaaactccagactacatgactctgcagccactt
gacgtgggttttggagcaatagctgagcactgcaaggaactaaggcgtctctcgctctcg
ggtcttctgactgacaaggtgtttgaatacattgggacatacgccaagaagttggagatg
ctgtcagtggcctttgcgggagatagtgaccttgggctgcatcatgttctatcggggtgc
gacagcctgagaaaattagagataagggactgcccctttggggacaaggtgcttttagcc
aacgctcctaagctggagacaatgcgatccctttggatgtcatcttgttccgtgagtttt
ggggcgtgtaaactgctaggcctgaagatgccgaggctcaatgtggaagtcattgacgaa
aggggtccacccgactctagacctgacagctgcccggtggagagggtgtatatatacaga
acggtggcaggccctcggtttgacatgcctgggtttgtgtggaacatggacgaggactct
agcatgaggttttcccggcagattgtgacatga
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