Tarenaya hassleriana (spider flower): 104818014
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Entry
104818014 CDS
T04125
Name
(RefSeq) formamidopyrimidine-DNA glycosylase isoform X1
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
thj
Tarenaya hassleriana (spider flower)
Pathway
thj03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
thj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
104818014
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
thj03400
]
104818014
Enzymes [BR:
thj01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
104818014
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
104818014
DNA repair and recombination proteins [BR:
thj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
104818014
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
Fpg-like_C
NFACT_N
Motif
Other DBs
NCBI-GeneID:
104818014
NCBI-ProteinID:
XP_010545745
LinkDB
All DBs
Position
Unknown
AA seq
440 aa
AA seq
DB search
MPELPEVEAARRAIEDNCLGKKIKRSIIAADNKVIDGISPSEFETSILGKTIVSARRKGK
NLWLELDSPPFPSFQFGMAGAIYIKGVSITEYKRSAVKDTEEWPSKYSKFFVELDDGLEL
SFTDKRRFAKVRLLENPASVPPISELGPDALLEPMTVDELAESFAKKKIAIKPLLLDQNF
ISGIGNWIADEVLYQARIHPLQTSSSMSNEQCAALHKSIKEVIERAVEVGADSSQFPSNW
IFHVREMKPGKAFIDGKKVEFITAGGRTTAYVPELQKLSGKDVAKAAKVKAAKNGAKSKE
GNEDEDEDEEEDEQEKEGEDGGAKLKKGQKPRGRGKRLAGKRKPKESDDEDDGEVEENDA
KPKKSVVAPRGRGMKATGKRKSEDSNADVDDSGTDDDGDDDDDDDDDGGNKKPRKRARAG
KATQQKAPAKTSKKKPKGRS
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgccggagcttccggaggtggaggccgcgaggagggccattgaggacaactgcttgggg
aagaagatcaagcgatccatcatcgccgccgacaataaggtgatcgacggaatctccccg
tcggaattcgaaacgtcgatcctcggcaaaaccatcgtctctgctcgtaggaagggaaag
aacctctggctcgagctcgattcccccccgtttccctcattccagttcggtatggctggt
gctatctatataaaaggcgtctcaattacagagtataagaggtctgctgtcaaggacaca
gaggaatggccatccaaatattctaagtttttcgtggagcttgatgatggcctggagctt
tctttcacggacaagaggagatttgccaaagttcggctgctagaaaatcctgcttctgta
ccgccaatttcagagcttggccctgatgcattgttggagcctatgacagttgatgaactt
gcagaaagcttcgctaagaagaagatagccatcaaacctctcttacttgatcagaatttc
atttcaggtattggaaactggattgctgatgaagtgctttaccaagcaagaatccaccct
cttcagacctcttccagtatgtccaacgaacaatgtgctgctttacacaaatccatcaag
gaggtgatagaaagggcagtggaagtcggggctgacagtagccagtttcctagtaactgg
atttttcatgtcagagaaatgaagccaggaaaggcttttattgatgggaagaaggttgag
ttcataactgcaggtggcaggacaacagcctatgtgcccgagctgcaaaagctttctggg
aaagatgtggcaaaagcagcaaaggtcaaagcagcaaaaaatggtgctaaatctaaagaa
ggcaatgaagatgaagatgaagatgaagaggaagatgaacaagaaaaagagggtgaagat
ggtggtgctaaattgaagaaagggcagaaacctagagggcgtggtaagaggcttgctgga
aagagaaaacccaaagagagtgatgatgaggatgatggcgaggtggaagagaatgatgcc
aaaccaaagaaaagtgtggtggcacccagaggtcgcggcatgaaggcaacaggaaagaga
aaatctgaagacagcaatgcggatgttgatgattctggaacagatgatgatggtgatgat
gatgatgatgatgatgatgatggtggaaacaagaaaccaagaaagcgagcgagagcaggc
aaggcaacccaacagaaagctcctgcaaaaactagtaagaagaagcccaagggaaggagt
taa
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