Tarenaya hassleriana (spider flower): 104818343
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Entry
104818343 CDS
T04125
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH14
KO
K18663
activating signal cointegrator complex subunit 3 [EC:
5.6.2.4
]
Organism
thj
Tarenaya hassleriana (spider flower)
Brite
KEGG Orthology (KO) [BR:
thj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
thj03400
]
104818343
Enzymes [BR:
thj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
104818343
DNA repair and recombination proteins [BR:
thj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
104818343
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec63
DEAD
WHD_SNRNP200
DExH14_plug
ResIII
Helicase_C
AAA_22
AAA_30
Helicase_PWI
DEXQc_Suv3
AAA_19
T2SSE
Motif
Other DBs
NCBI-GeneID:
104818343
NCBI-ProteinID:
XP_010546203
LinkDB
All DBs
Position
Unknown
AA seq
2083 aa
AA seq
DB search
MLVQLPRLTSSLREPFDIDQAYLNRKTVLQNLDKPRSSKNALDESELARRIVHQWDGASP
DVRQAYKQFIGAVVELIDREIPSDDFREVAFAAYRLFGRTEKDDDNSNNKSIAEKKLELQ
NLVGHAVSDANLKKVVSLAQILYTLQPCHQSETYVNEIDGRAEFGADLVFNAPARFLVEA
PLEDGGFMDEESNETSVSFAEGWSDFNDTTNNRPAGKYNLSWLRDACGRIVRESNSQLSR
DELAMAICRFLDSEKPGEEIAGDLLDLVGDDAFEIVQDLISHRKEIVNAIHHGQSVLKSD
KTASNSQSQMPTYGTQVTVQTESARQIEKLRRKEEKRNKRSTELGLENEISAANFSSLLE
ASERKNALDNLIGSGEGSNSLAVALPQGTIRKHLKGYEEVIIPPTPTAQMKPGEKLIEIK
ELDDFAQAAFHGYKSLNRIQSRIFQTVYLTNENILVCAPTGAGKTNIAMISILHEIKQHF
RDGYLHKNEFKIVYVAPMKALAAEVTSAFSCRLAPLNMIVKELTGDMQLTKNELEETQMI
VTTPEKWDVITRKSSDMSLSMLVKLLIIDEVHLLNDDRGPVIEALVARTLRQVESTQTMI
RIVGLSATLPSYREVAQFLRVNPDTGLFFFDSSYRPVPLAQQYIGISEHNFAARNELLHE
ICYKKVVDSLRQGHQAMVFVHSRKDTAKTAEKLIELARKYEAADLFKNDSHPQFGLMKKE
VMKSRNKDLVNFFEAGVGVHHAGMLRADRTLTERLFADGLLKVLVCTATLAWGVNLPAHT
VVIKGTQLYDPKAGGWKDLGMLDVMQIFGRAGRPQFDKSGEGIIITSHDKLAYYLRLLTS
QLPIESQFISSLKDNLNAEVVLGTVTNVKEACAWLGYTYLSIRMRLNPLAYGVGWDEIIA
DPSLTLKQRALVTDAARALDKAKMMRFDEKSGNFYCTELGRIASHFYIQYSSVETYNEKL
KRHMNESEIIDMVAHSSEFENIVVREEEQNELEMLVRSCCPLDIKGGPSNKHGKISILIQ
LYISRGSIDTFSLVSDAAYISASLARIMRALFEICLRRGWCEMSLFMLEYCKAVDRQVWP
YQHPLRQFGRDISFDVLRKLEERGADLDRLYEMEEKDIGALIRYNPGGKLVKQYLGYFPS
ILLSATVSPITRTVLKVDLVITPDFVWKDRFHGAALRWWILIEDTENDHIYHSELFTLTK
RMARGEPQKLSFTVPIFEPHPPQYYVHAVSDSWLHAESFYTISFHNLALPEARTSHTELL
DLKPLPVTALGNKLYESLYKFSHFNPIQTQIFHVLYHTDNNVLLGAPTGSGKTISAELAM
LRLFSTQPDMKIVYIAPLKAIVRERMNDWRKHLVARLGKEMVEMTGDYTPDLVALLSADI
IISTPEKWDGISRNWHTRSYVKKVGLVILDEIHLLGAERGPILEVIVSRMRYISSQTERA
VRFVGLSTALANAGDLADWLGVGETGLFNFKPSVRPVPIEVHIQGYPGKYYCPRMNSMNK
PAYAAICTHSPTKPVLIFVSSRRQTRLTALDLIQFAASDEHPRQFLNMAEEDLQMVLSQV
IDQNLRHTLQFGIGLHHAGLNDHDRSVVEELFVNNKIQVLVSTSTLAWGVNLPAHLVIIK
GTEYFDGKTKRYVDFPLTEILQMMGRAGRPQFDQHGKAVILVHDPKKSFYKKFLYEPFPV
ESSLKEQLHDHFNAEIVSGTVGNKEDAVHYLTWTYLFRRLMGNPAYYGLESTEDETVCSY
LSRLVQNTFEDLEDSGCIRINENSVEPMMLGTIASQYYLGYMTVSMFGSNIGADTTLEAF
LHILAGASEYDELPVRHNEENYNKALSEKVRYPVDKNHLDDPHVKANLLFQAHFSQLALP
ISDYVTDLKSVLDQSIRILQAMIDICANSGWLSSSLTCMHLLQMVMQGLWFGQGSSLWMI
PCMNDDLLGCLTKRGIHTLKQLLDLPKPAIQSITGNSATSRLFQDLQHFPRIQMKVRLQK
KGAGSEKPSSLEIKLEKTSKRNNSRAFAPRFPKVKDEAWWLVLGNTSTSQLYALKRVSFT
GRLVTRMELPPNSNSFQDMKLILVSDCYVGFEQEQSIEDVAER
NT seq
6252 nt
NT seq
+upstream
nt +downstream
nt
atgttggttcagcttccccgcttgacgagctctctcagagagccgttcgacatcgaccaa
gcgtatcttaaccggaaaaccgttctgcaaaacctcgacaaacctcgcagttccaagaat
gcacttgatgagtcagagcttgccaggaggatagttcatcaatgggatggagcttctcct
gatgtgcggcaagcatacaagcagtttattggagctgtagtggagttgattgacagggaa
attccatcagatgactttcgcgaggttgcttttgctgcatatcgtctttttggaagaaca
gaaaaagacgatgacaattcaaataataaaagtattgctgagaagaagttagagctgcaa
aaccttgttggacacgctgtctcagatgctaatcttaagaaagttgtctccttagctcag
atactttatacactacagccttgtcaccagtctgagacatatgtcaatgagattgatggc
agagctgagtttggtgctgaccttgtttttaacgcaccagctcggtttctggttgaagca
cctcttgaagatggagggtttatggatgaggaaagcaacgagacctctgtatcatttgct
gaaggatggagcgatttcaatgacacaacaaacaatcggcctgcaggaaaatataattta
agttggctgagagatgcatgtgggcggatagttagagaaagtaattcacagctgtctcgc
gatgaattggctatggctatatgccgattcctagactcagagaaacctggtgaggagata
gctggggatttgttagaccttgttggggatgatgcatttgagattgttcaagaccttata
tcccatcgaaaagaaattgtcaatgcaatccaccatggtcaatcggtactcaagtctgac
aaaacggcttcaaactcccaatctcaaatgcctacctatggtacacaggttactgttcaa
acagagtctgcgaggcaaatcgaaaaactccggcgcaaggaggaaaagagaaacaagcgc
agcaccgaacttggtttagagaatgaaatatctgcggcaaacttttcttccttacttgaa
gcaagtgaaaggaagaatgctttggataatttgattgggtctggtgaaggaagcaattct
cttgccgttgctcttccccaaggtactataaggaagcacttaaaaggatacgaggaagtg
attatccctccgaccccaactgcacaaatgaaacctggagagaagttgattgagataaaa
gagttagatgactttgctcaagctgcatttcatggttacaagtctttgaaccgcatccaa
agtcgaatatttcagacagtttatctcacgaacgagaatatattggtttgtgctccaaca
ggagctggtaaaacaaatatagctatgatttctattctacatgagattaaacaacacttc
agggatgggtacttgcacaaaaacgagtttaagattgtttatgtagctcccatgaaggca
ttagctgcagaagtaacatcagcatttagctgtcgtttagctccattgaatatgattgtg
aaggaacttactggagatatgcaactcaccaagaatgaacttgaagaaactcagatgata
gtgacgacacctgagaaatgggatgtcattactcgtaaaagtagtgatatgtcattatca
atgctcgtaaaactcttaataattgatgaagtgcatcttctgaatgatgatcgaggtcca
gtaattgaggctcttgtagctcggaccctccgtcaggtggagtcaactcagacaatgata
agaatagttggcctgtcagccactttgccaagctaccgagaggttgctcagtttctccga
gtgaatccagacacaggccttttcttttttgattccagttatcgcccagtgcccctcgct
cagcagtacatagggatcagcgagcataactttgcagctagaaacgaattgctacacgag
atttgctacaaaaaggttgttgattcacttagacaaggtcatcaagcaatggtttttgtt
cattcccgaaaagatacagcaaaaacagctgagaaactgattgagcttgcccggaaatat
gaggctgccgatttgtttaagaatgatagtcatccacagtttggcctgatgaagaaagaa
gtcatgaagtccagaaacaaggatcttgtcaatttctttgaagctggtgttggtgttcat
catgccggaatgctgcgagctgatagaacacttactgagaggctttttgctgatggactc
ttgaaagtgcttgtttgcactgcaacccttgcatggggtgtaaatctgcctgcacacaca
gttgttattaagggaacacagttgtatgatccaaaggctggagggtggaaagacctgggg
atgcttgatgtcatgcagattttcgggagggccgggagaccccagtttgacaagagtggt
gaaggcattatcattacatcccatgacaagctagcatactatctacggttgctgacaagt
caacttcccatagaaagtcagtttataagctccttgaaagacaatttaaacgcagaagtg
gttttgggaaccgtgacaaatgttaaggaagcttgtgcttggcttggatatacatatttg
tccatccggatgagattaaatcctttggcttatggggttggatgggatgagataattgcg
gatccttctttaactttgaagcaacgggcacttgtgactgatgctgcacgtgcacttgac
aaagctaagatgatgcggtttgatgagaaaagtggaaacttttactgcactgagctcggg
cgaatcgcaagtcacttctatatccaatattctagtgttgaaacatacaatgaaaaattg
aagcggcacatgaatgaaagcgagataattgatatggttgcccattcttccgaatttgaa
aatattgttgtaagagaggaggaacagaatgagcttgagatgcttgtacgcagttgctgc
ccattagacattaaggggggtccttcaaacaagcatggaaaaatttcaattctcattcag
ttgtacatatcccgtggttcaattgatacattttctcttgtctccgacgctgcatatata
agcgctagtttagcacggataatgcgtgctctttttgaaatttgcttgcgaagagggtgg
tgtgagatgtctttatttatgttggaatactgcaaggcagttgatcgccaagtttggcct
tatcagcatcctctaaggcaattcgggagggatatatctttcgatgtgttgagaaaactc
gaagagcgaggggctgacttagaccgtctatatgagatggaggagaaagacattggagca
ctgattcgctacaatcctgggggaaagttggtcaagcaatatctaggatactttccttca
attctgttgtcagctactgtcagtccaattacacgcactgtattgaaggttgatttggtt
ataactccagattttgtttggaaagatcgctttcatggcgctgctctacgttggtggatt
ctcatcgaggacactgagaatgatcatatttaccactcagagctttttacactgacaaag
cggatggctagaggggaacctcagaagctttccttcactgtaccaatatttgaaccgcat
ccacctcaatactatgttcatgctgtttctgactcttggttgcatgcggagtctttctac
acaatttctttccataaccttgcattaccagaggcacgaacttctcacacggagcttctg
gacttgaaacctcttcccgtaactgctcttgggaataagttatatgaatcactttataag
ttttctcatttcaatccaatccagacccagatatttcatgtgttgtatcatacagacaac
aatgttctcttaggagctccaactggaagtggaaaaactatatctgccgagcttgccatg
ctacgtctattcagtactcagcctgacatgaagattgtttatatagcaccactgaaggcc
atcgttcgggaaagaatgaatgattggagaaaacatcttgttgctcgacttggaaaggaa
atggttgaaatgaccggagattatactccagatctggtagctctcttgtcagcagatatc
attatatctacccctgaaaaatgggatggtattagtcggaattggcatactcgaagttac
gtaaaaaaggtcggactagtaattttggatgagattcacttgctgggagctgaaagagga
cccatccttgaggttatcgtctctaggatgagatatatatcatcacagaccgaacgtgca
gtgagatttgttggtctttctactgctctagcaaatgcaggtgatttggctgattggttg
ggcgttggagagactggacttttcaattttaagccaagtgtcagacctgtacctattgaa
gttcatatccagggttatcctggaaaatattactgcccaaggatgaatagcatgaacaag
ccggcatatgcagccatatgtacccattcacctactaaaccagttcttatatttgtttca
tctcgtagacagacaaggcttacggcactagaccttattcagtttgcggcctcagatgag
cacccacggcagtttctgaatatggcagaggaagacttgcagatggtcctctcccaggtc
attgaccaaaacctaaggcatacgttgcaatttggtattgggttgcatcatgcaggattg
aatgatcatgatagatctgtggttgaagagcttttcgtgaacaacaagattcaggtgttg
gtctcaacaagtaccttagcatggggagtaaacttaccagcccacttggttatcataaag
ggaacagagtatttcgatggaaaaaccaaaagatatgttgacttcccacttacagagatc
ttgcaaatgatgggtcgggcaggccgtccgcagtttgatcaacatgggaaagcggtcatt
cttgtacatgatcctaaaaagagtttctacaaaaagttcttgtatgagccattcccagtt
gaaagcagcctgaaagagcagttgcacgatcacttcaatgcagaaattgtttctgggaca
gttggcaataaagaagatgctgtgcattatcttacctggacctacttattccgtagactg
atgggtaatcctgcctactatgggctagaaagcactgaagatgaaacagtgtgttcctac
ttgtcaagattggtgcagaacacattcgaggatctggaggacagtggatgcatcagaata
aatgaaaacagtgtggagcctatgatgctgggtacaatagcatcacagtattacctcggc
tacatgacagtgtccatgtttggttctaatataggcgctgacacgacactcgaagcattt
ttgcatatcttggctggtgcatccgagtatgatgaacttccagtgaggcacaatgaggaa
aattacaacaaagcgctgtctgagaaagtccgatatcccgtggataagaaccatctagat
gatcctcatgttaaggctaatctgctcttccaggcacatttttctcagttggcacttccg
atcagtgattatgtcacggatttaaagtcggtgctggaccaaagcattcggatcctccaa
gccatgatcgatatatgcgccaacagtgggtggctctcgagctctctcacttgcatgcat
cttttgcaaatggtcatgcagggcttgtggtttggtcaaggttcttcgctgtggatgatc
ccatgcatgaacgatgatcttctcggatgtctgaccaagagaggaattcacactctgaag
cagttattagatcttccgaaacctgctatccaaagcataacgggaaactcagcaacttcg
agactatttcaagatctacagcactttccccggattcagatgaaagtgagactccagaag
aagggagctggcagtgagaaaccttcatcgctcgagatcaagttggagaagacttctaag
aggaacaactcgagggcatttgctcctcgtttcccgaaggtgaaagacgaggcatggtgg
ttggttttgggtaacacctcaacttcgcaactctatgccctgaagagagtttctttcacc
ggccgtctcgtcactcgcatggagttgcctcctaattccaactctttccaggatatgaaa
ctcattttagtttcagattgttatgtcgggtttgagcaagaacagtccattgaagatgtc
gcagagcgttga
DBGET
integrated database retrieval system
