KEGG   Tarenaya hassleriana (spider flower): 104818942
Entry
104818942         CDS       T04125                                 
Name
(RefSeq) sm-like protein LSM5
  KO
K12624  U6 snRNA-associated Sm-like protein LSm5
Organism
thj  Tarenaya hassleriana (spider flower)
Pathway
thj03018  RNA degradation
thj03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:thj00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    104818942
  09123 Folding, sorting and degradation
   03018 RNA degradation
    104818942
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:thj03019]
    104818942
   03041 Spliceosome [BR:thj03041]
    104818942
Messenger RNA biogenesis [BR:thj03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     104818942
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     104818942
Spliceosome [BR:thj03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    104818942
SSDB
Motif
Pfam: LSM DUF7452 Ntox4
Other DBs
NCBI-GeneID: 104818942
NCBI-ProteinID: XP_010547049
LinkDB
Position
Unknown
AA seq 87 aa
MANNPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITSEGR
RITKLDQILLNGNNIAILVPGGSPEAE
NT seq 264 nt   +upstreamnt  +downstreamnt
atggcgaacaatccatcgcagcttcttccatcagagttgatcgacaggtgcataggatcg
aagatatgggtaataatgaaaggagacaaggagcttgtgggtactctccgagggttcgat
gtttacgtcaacatggtccttgaggatgtcaccgagtatgagattacatcggaagggaga
aggatcacaaagctcgatcagatattgcttaacggcaacaacattgccattctggttcct
ggtggctctccagaggcagaatga

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