Tarenaya hassleriana (spider flower): 104819400
Help
Entry
104819400 CDS
T04125
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit B-like
KO
K07466
replication factor A1
Organism
thj
Tarenaya hassleriana (spider flower)
Pathway
thj03030
DNA replication
thj03420
Nucleotide excision repair
thj03430
Mismatch repair
thj03440
Homologous recombination
thj03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
thj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
104819400
03420 Nucleotide excision repair
104819400
03430 Mismatch repair
104819400
03440 Homologous recombination
104819400
03460 Fanconi anemia pathway
104819400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
thj03000
]
104819400
03032 DNA replication proteins [BR:
thj03032
]
104819400
03400 DNA repair and recombination proteins [BR:
thj03400
]
104819400
Transcription factors [BR:
thj03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
104819400
DNA replication proteins [BR:
thj03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
104819400
DNA repair and recombination proteins [BR:
thj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
104819400
MMR (mismatch excision repair)
104819400
DSBR (double strand breaks repair)
HR (homologous recombination)
104819400
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
DUF5651
Motif
Other DBs
NCBI-GeneID:
104819400
NCBI-ProteinID:
XP_010547749
LinkDB
All DBs
Position
Unknown
AA seq
626 aa
AA seq
DB search
MESSLTPDVISTVLSNPSLDSSSDRPEIVVQVVDLKPTGNRYTFSASDGKMKVKAIFPAT
LTSDIISGKIQNLGLIRLLDYTVNDIPSKSEKYLLVTKCEAVASALESEIKYNIKTEGSS
VAIKPKQLADAGNEVKTETSTGMMLKPKQEFVAKSASQIINEQRGNAAPAARMAMTRRVH
PLVSLNPYQGNWTIKVRVTNKGVMRTYRNARGEGCVFNVELTDEEGTQIQATMFNEAAKR
FYDRFDLGKVYYISRGTLKLANKQFKTVQNDYEMTLNDNSQVEEASNEETFIPETKFNFV
PIDELGAYVNQKELVDVIGVVQSVSPTMSIRRKNDNEMIPKRDITVADESKKTVVVSLWN
ALATGIGQELLDMADESPVVAIKSLRVGDFQGVSLSTISRSNVVVNPDLPEAKKLKSWYD
SEGKEASMSAIGSGMSPSAKNGSRSMYSDRVHLSQILSNPSLGEEKPVFFSIRAYTSFIK
PDQTMWYSACKTCNKKVTEAFGSGYWCEGCQKNYEGCNLRYIMVMKATDSTGEGWLSTFN
EEAEKIIGCSAEELNKLKSEEGEANEFQTKLKGATWASHVFRVSVSQHEYNSEKRQRITV
KSVAPLDFAAETRLLLEDISKNKTSQ
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atggagagctcgttgaccccagatgttatctccactgtgttgtcaaacccgtctcttgat
tcgtcctcggatcgacctgagatcgtcgttcaggttgtggatctcaagcctaccggcaat
cgatacacatttagcgccagtgacgggaagatgaaagttaaggcaatattcccagcaacc
ttgacatctgatataatctccgggaagatccaaaatctcggtctaatccgtctgcttgat
tataccgtcaatgatatcccgagcaaatctgagaaatatctgcttgtgacaaaatgtgaa
gccgttgcttcagctcttgaatcagagattaaatacaacattaagacagaaggctcaagt
gttgccataaagccgaaacaactggccgatgcaggaaatgaggtcaaaacagaaacttcc
actggaatgatgttgaaaccaaagcaagaatttgttgccaaatcagcctctcagattatc
aatgaacaacgtggaaatgcagcaccggctgcaagaatggccatgacgaggagggttcat
cctcttgtgtcgttgaacccttaccaaggaaattggaccattaaggtccgtgtcacaaac
aaaggagtcatgagaacttacaggaacgctagaggagaggggtgtgtctttaatgtggag
ctaactgatgaagaaggaactcagattcaggccaccatgttcaatgaagctgcaaagagg
ttttacgatagatttgacctgggaaaggtctattatatctcaagggggacacttaaactt
gctaacaagcagttcaagacagttcagaatgattatgagatgaccctaaatgataattct
caagtcgaagaagcaagtaatgaagaaacgtttatacccgagacaaaatttaattttgta
cccattgatgagttgggtgcatatgttaatcagaaggaacttgttgatgttatcggtgtt
gttcaaagtgtttctccaacaatgagtattagaaggaagaatgacaatgagatgattccc
aagagggatataaccgtggctgacgagtcaaagaaaactgttgtcgtgtccctttggaat
gctctggcaactgggataggacaagaacttctagacatggctgacgaatcacctgtagtt
gcgattaagtccctaagagttggggactttcaaggcgtttcattgtccactatcagcaga
agcaatgtggtggtgaatcctgatttaccggaagctaagaagttgaaatcttggtatgat
tctgaaggtaaggaagcatccatgtctgccattggctcaggaatgagcccttctgccaaa
aatggatcaagatctatgtactctgacagagttcatctttcccaaatcctgagcaaccca
tctctaggggaggagaagcctgtgtttttcagcattagagcttacacaagctttatcaag
ccggaccagacgatgtggtacagtgcttgcaagacctgcaacaagaaagtaacagaggca
tttggctctggctactggtgtgaaggttgtcagaaaaattatgaaggatgcaacttaaga
tacatcatggtcatgaaagctactgattcaactggtgaaggttggttgtctacattcaat
gaagaagcagagaagattattggctgttcagccgaggagctcaacaaactgaaatctgag
gaaggggaagctaacgagtttcagacaaaactgaagggggcaacctgggcatctcatgtc
ttccgggttagtgtttctcaacacgaatacaacagcgagaagaggcagaggataactgtg
aaaagcgttgccccacttgatttcgctgctgaaacaagactcttgcttgaggacatatcc
aagaacaagacatcccagtag
DBGET
integrated database retrieval system
