Tarenaya hassleriana (spider flower): 104820130
Help
Entry
104820130 CDS
T04125
Name
(RefSeq) polygalacturonase QRT2
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
thj
Tarenaya hassleriana (spider flower)
Pathway
thj00040
Pentose and glucuronate interconversions
thj01100
Metabolic pathways
Module
thj_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
thj00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
104820130
Enzymes [BR:
thj01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
104820130
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Motif
Other DBs
NCBI-GeneID:
104820130
NCBI-ProteinID:
XP_010548804
LinkDB
All DBs
Position
Unknown
AA seq
432 aa
AA seq
DB search
SLLLFDPDDAFHGTNLHNHISYNDFSERVHVFHVPRSYKYGKTIGPVTHHRVGNAPMSSP
QVFNVDDFGARGDGSDDSKAFEKAWDEACSSSSKTAFFVVPSNKAYRLRPITFSGPCRPQ
FIVFKIYGKLEASKNPSDYEMDRRYWIVFESVNNLRVEGGGIIDGNGQIWWKKSCKINPS
LPCKEAPTAVTFEECKNLIVSKIRLQNAQQMHLTFKDCENVKAFGIMVTSPGNSPNTDGI
HVTATKNILISDSVVRTGDDCISIVSGSVNVRATGITCGPGHGISIGSLGEGNSEAYVSN
VVVNKATIIGTTNGVRIKTWQGGRGYAKNIVFQDIIMKNVTNPIIIDQNYCDRDGSCPEQ
ASAVRVSNVVYRNIQGTSSTPTAVKFDCSKSIPCRGISMQNVKLKDQSEEISKASCSNVN
FNTRGPVSPICT
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
tctcttcttctcttcgatcccgatgatgcttttcatggaaccaatctccataaccacatc
tcgtacaacgatttcagtgaaagagtccatgttttccacgtaccgagatcgtataaatac
ggaaaaaccatcggaccggtgacccatcatcgcgtcggaaatgctcccatgtcttctccc
caagttttcaacgtcgatgattttggagctagaggcgatggatccgacgattcaaaggca
tttgaaaaagcttgggatgaagcttgctcgtcctcttcgaagacagcattcttcgtggtt
cctagtaacaaagcttatcgtcttagaccgatcacattctccggtccatgtagaccacaa
ttcatcgtatttaagatttatggaaagctcgaggcctcgaagaatccgtcggactacgag
atggataggagatattggatcgtgttcgaaagcgtaaataacctgcgggttgagggcggc
ggaatcatcgacgggaacggccaaatttggtggaaaaaatcttgcaaaatcaacccttca
cttccctgcaaggaagcccctacggcggttacgtttgaggagtgcaagaatttgatagtg
agcaaaataaggttacaaaatgcgcagcaaatgcatttgacgtttaaagactgcgaaaac
gtcaaggcttttgggataatggtgacgtctccggggaatagtcccaacaccgacggcatc
cacgtcaccgccaccaaaaatatcctcatctccgactccgtcgtccgtacaggtgatgat
tgcatatcgatagtgagtgggtcggtaaatgtgcgggcgacgggtatcacatgcgggccg
ggtcatggaatcagtattggaagtttgggtgaagggaactcggaagcttacgtgtcaaac
gtagtagtcaacaaagcgaccatcataggaaccaccaacggtgtccgaatcaagacttgg
cagggagggagaggatatgccaaaaacatcgtgtttcaagacatcataatgaagaatgtc
accaacccaataatcatcgatcagaattactgtgatagagatggttcatgccccgagcag
gcatcggcggttcgagtgagcaatgtggtatacaggaacatacaagggacgagttctact
cccacggctgtgaaattcgattgcagtaagagcattccttgtaggggcatttctatgcaa
aatgtgaaattgaaggaccaaagtgaagaaatctcaaaggcttcgtgctcaaatgtcaat
ttcaacactcgaggaccagtctctccgatttgcacttag
DBGET
integrated database retrieval system