Tarenaya hassleriana (spider flower): 104820242
Help
Entry
104820242 CDS
T04125
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH7, chloroplastic isoform X1
KO
K18995
ATP-dependent RNA helicase DHX29 [EC:
5.6.2.6
]
Organism
thj
Tarenaya hassleriana (spider flower)
Brite
KEGG Orthology (KO) [BR:
thj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
thj03012
]
104820242
Enzymes [BR:
thj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
104820242
Translation factors [BR:
thj03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
104820242
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
UBA_DHX29
DEAD
Helicase_C
HA2_C
HA2_N
DSRM_DHX29
nSTAND3
AAA_22
AAA_19
dsrm
DND1_DSRM
ATPase
T2SSE
Motif
Other DBs
NCBI-GeneID:
104820242
NCBI-ProteinID:
XP_010548925
LinkDB
All DBs
Position
Unknown
AA seq
1455 aa
AA seq
DB search
MAPKKKPLKQSKKSSGSSSSSSKPNKQNSSSAPKLQISAENENRLRRLLLNTGLSASAAP
LPPNPLQSSLSRTQKAKKLTDVYEKLSCEGFLDDQIELALSSLRDGATFETALDWLCLNL
PSHELPLKFSTGTSLFPTEGGSVGVISISREDWVEPADSSARFEQEKPEVLVQAKGKRDQ
DTLTSCQSSQADWIRQYMERQQEEELESWEDEADDIGFGKEVSGPRHFDVIVKDYCAARL
DAMKAKEKGDKKGQQRAGQAISVLKQEISALGLPEGMLESEFQREQALNSTIEEGFTVSM
PDNIDGSVSADVTPFQPSDDPTMDETSVGSGRSEEVQPKALPSSSSGQELVASDGSTEDV
ELGDMFSEDVPPAEASPHEILELQKKEMMRELCSEKNLVKLEGIWKKGESRRIPKAFLHQ
LCQRSGWEAPKFNKVVEEGRSFSYIASILRKATGRGKSRQAGGLVSLRLPGKDEIFESTE
DAQNKVAAFALYKLFSDLPVHFAITEPYASLILTWKQEELLGNVQREEDRRADFVDRLLK
TDSSSLGASPEIINDAHQVLDLNVGENDRLGVLISDQKAKRHSTIEAESFSLRQKQQNKM
KIPKYQNMLKTRAALPITEVKNDILRHLKEKDVLVVCGETGSGKTTQVPQFILDDLIESG
HGGYCNIICTQPRRIAAISVAQRVADERCESSPGSDDSLVGYQVRLESARNDKTRLLFCT
TGILLRKLAGDKSLKGVTHIIVDEVHERSLLGDFLLIILKNLIEKQSCDDATPKLKVILM
SATVDAEQFSRYFGHCPVVTAQGRTHPVTTQFLEDIYELTSYHLAPDSPAALRSDSSIKD
QLGPVNDRRGKKNLVLAGWGDDYLLSEGPSNPFYDPSNYSSYCDQTQKNLKRLNEDITDY
ELLEELICHIDDTCDEGAILVFLPGVSEIYTLLDRLAASYRFGGPSADWLLPLHSSIASA
EQKKVFLRPPENIRKVIVATNIAETSITIDDVVYVIDSGKHKENRYNPQKKLSSMVEDWI
SQANARQRRGRAGRVKPGICFSLYTRHRFEKLMRPYQVPEMMRMPLVELCLQIKLLGLGY
IKPFLSKALEPPSEGAIASAISLLHEVGAIEGDEELTPLGHHLAKLPVDLLIGKMLLYGG
IFGCLSPILSIAGFLSYKSPFLYPKDEKQHVDRAKLALLTDKPGSSDSNNNDKQSDHLLM
MVAYDKWVKILHEQGPKAAQRFCDSNFLSGSVMRMIRDMRVQFGTLLADIGLIDVPKIQG
RKSETLDLWFSDKSQPFNLYSQQPEIVKAILCAGLYPNIAATEKGITDAAFKSLTKKEQQ
PKPYALFDGRREVHIHPSSINSSLKSFQYPFVVFLEKVETNKVFLRDTTVVSPFSILLFG
GSISIHHQIGTVTIDGWLELTAPAQTAVLFKELRVTLHSILKDLIRKPEKSSIVHNEVVK
SMVNLLLEEGKPKHS
NT seq
4368 nt
NT seq
+upstream
nt +downstream
nt
atggctccgaagaagaaaccactaaagcagagcaagaaaagctccggttcttcgtcgtca
tcttcgaaaccaaacaagcagaactcttcttctgctcctaagttgcagatatcggcggag
aacgagaatcggttgcggcggctcttgctgaacaccggcctctctgcttccgccgctccg
ctgcctccgaacccacttcagagttcgctctccaggacccagaaggcgaagaaactcaca
gatgtgtatgagaagctctcttgtgaagggttcttggatgatcagatcgagcttgctctc
tcttctctccgagatggtgcgacgtttgaaactgcccttgattggctttgcttgaatttg
ccgagtcacgagttgcctctgaagttttcaactggaacttccctgtttccgaccgaaggc
ggttctgtgggtgtgatatcaatttcaagggaagattgggttgagccggcagactcttca
gcccggtttgagcaggaaaagcctgaagttttagttcaggcaaagggcaaacgtgatcaa
gatactcttacttcttgccaatcatctcaggctgattggatccgtcaatatatggaaaga
caacaagaggaggaattggaatcgtgggaagatgaggcagacgatattggcttcggcaag
gaggtgtctggcccaaggcatttcgatgttattgtcaaagactattgtgcggcaaggttg
gatgctatgaaagcaaaggaaaaaggtgataaaaaagggcagcagcgagcaggccaagcc
atatctgtgctcaagcaagagatatctgctctagggcttccagaaggaatgttggaatca
gaatttcagcgtgaacaagcattaaacagcactattgaagaaggatttactgtttccatg
cctgataacattgatgggtcagtaagtgctgatgttactccgtttcagccatcagatgac
ccgaccatggatgaaacatctgttggaagtggtagatctgaggaggttcaacccaaagct
ctcccttcaagttcctctggacaagaactggttgcctcagatggttctacagaggatgtg
gagcttggtgatatgttctcggaagatgttcctcctgccgaagcttctccccatgaaatc
ctagaattgcaaaagaaggaaatgatgagagaactatgcagcgagaaaaatctggtgaaa
ctagagggcatttggaagaagggtgaatcacggaggatccctaaggctttcctccatcaa
ttgtgtcaaaggtcagggtgggaagcgccaaagttcaacaaagtagttgaagaaggaagg
agtttttcatatattgcaagtattctgcgtaaagccactggacggggtaaaagcagacaa
gctgggggactggtcagccttcgacttcctggaaaggatgaaatatttgagtccactgag
gatgcacaaaacaaagttgcggcatttgctctttataaactattttctgatttacctgtt
cactttgcaattacggagccttatgcatctcttattttgacgtggaaacaagaggaattg
ttgggtaacgtacagagagaagaagatcgaagagctgattttgttgataggttgcttaag
acggacagttctagtttgggtgcttctcccgagattatcaatgacgcgcatcaagttttg
gaccttaatgtcggagagaatgatcgcttgggtgttctcatttctgaccaaaaagctaaa
agacactctaccatagaggctgaaagtttctccctgagacaaaagcaacaaaacaaaatg
aaaattccgaagtaccagaatatgttgaaaactagagctgcgcttcctataactgaagtg
aagaatgacatattgcggcatctgaaggaaaaagatgtcctggtggtatgtggagaaaca
ggttctggaaagactacacaggtacctcaatttatattggatgatttgattgaatcgggt
catggtggatattgtaatatcatatgcacacaacctcggagaatagctgctatctctgtt
gctcaaagagttgctgatgagcgttgtgaatcctctccaggctcagatgattccttggtt
ggttatcaagttcgtctcgaaagtgcaaggaatgacaaaacaaggctgctcttttgtacg
actggcattctactgaggaaacttgcaggggataaatccttgaaaggggttacacatatc
atagttgatgaagtgcatgagcggtctcttttgggtgactttcttctcattattttgaag
aacctaattgagaagcaatcctgtgatgatgccacacctaagttgaaagttatcctcatg
tcggctactgttgatgcagagcagttttcaagatattttgggcattgtcctgtagttact
gcacaaggacgaactcatccagttactactcaatttctggaagacatttatgagcttaca
agttatcatcttgctccagattctcctgctgctctaagatctgacagttcaataaaagac
cagcttggtcctgtaaacgaccgtaggggaaaaaagaatcttgtcttggctggctggggc
gacgattatctgctctctgaaggcccttctaacccattttatgatcccagtaattacagc
tcatactgtgatcagacacagaaaaatttgaaaagattaaatgaggatattactgattat
gagcttcttgaagagttgatatgccacattgatgacacttgtgacgagggagctattctt
gtatttttgcctggagtgtctgaaatttacacgttacttgataggttggctgcctcgtat
cgatttggtgggccttctgccgattggcttcttcctctacattcttctattgcatctgca
gaacaaaaaaaggtgtttctgcgtccccctgaaaacatacggaaggttattgtagctacc
aatattgcggagaccagtataacaatagacgatgttgtgtatgtgattgactctggaaaa
cacaaggaaaatcgttataatccacaaaagaaattgtcaagcatggtggaagattggatc
tctcaagcaaatgcaagacaaagaagaggaagagctggacgtgttaaacctggaatttgc
ttttccttgtacactcgtcataggttcgagaagcttatgcgtccgtatcaggttcctgag
atgatgcggatgcctctggtagagttatgtttacaaatcaagttgcttggtctgggctac
ataaagccttttctgtccaaggctttggaacctccaagtgaaggagctatagcctctgcg
atttcattgttacatgaggttggtgccattgaaggggatgaagagttaacaccactcggg
catcatttggcaaaacttcctgttgatttgttgattgggaagatgctgctgtacggtgga
atatttggttgcctatcaccaattctctcaattgctgggtttttgagctataaatctcca
tttttataccctaaagatgagaaacaacatgtcgatagggccaaacttgctcttttgact
gataagcctggttcaagtgattcgaataacaatgacaaacaatctgatcacctgctgatg
atggttgcatatgacaaatgggtgaagatactgcacgagcaaggaccgaaagctgcacag
agattctgtgattcaaattttctaagcggttcagtgatgcggatgataagagacatgaga
gtacaatttggaacactgcttgctgacattgggctcattgatgttcctaagattcaaggg
agaaaatcagagactcttgatttatggttttctgataaatctcagcccttcaatttgtat
tcacaacagccggaaattgttaaggctatattatgcgcaggactataccctaatattgct
gccactgaaaagggaattacagatgcagcattcaaaagccttacaaagaaagaacagcag
ccaaagccttatgctttgtttgatggcagaagggaggtccatattcatccatcctcgatt
aacagctccttaaaatcatttcaatacccttttgtcgtgttcctcgagaaggtcgaaacg
aacaaagtatttctgcgggataccaccgttgtttctcctttctccattctactttttggt
ggttcaatcagcattcaccatcagattggaacagtcaccattgatggatggttggagctg
acagcacctgcccaaactgcagtcttgttcaaagaactccgagtaacccttcattccatt
ctcaaagatctcatacgaaagcccgagaaatcaagcattgttcataatgaagtggtcaag
tcgatggttaatctgctgctggaagaaggcaaacctaaacacagttaa
DBGET
integrated database retrieval system
