Tarenaya hassleriana (spider flower): 104820387
Help
Entry
104820387 CDS
T04125
Name
(RefSeq) phytochrome A-like
KO
K12120
phytochrome A
Organism
thj
Tarenaya hassleriana (spider flower)
Pathway
thj04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
thj00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
104820387
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PHY
PAS
PAS_2
GAF
HATPase_c
PAS_9
PAS_4
HisKA
PAS_8
PAS_3
Diguanyl_cycl_sensor
Motif
Other DBs
NCBI-GeneID:
104820387
NCBI-ProteinID:
XP_010549119
LinkDB
All DBs
Position
Unknown
AA seq
1124 aa
AA seq
DB search
MSASRPSQASGNSRRSRNSARIIAQTTVDAKLHADFEESGDFFDYSSSVRVTGPAAMEED
QPLKSDKVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPEMLTMVSHAVPSVG
EHPVLGIGTDIRTLFTVPSASALHKALGFGDVSLLNPILVHCKTSAKPFYAIVHRVTGSI
IVDFEPVKPSEVPMTAAGALQSYKLAAKAITRLQSLSSGSMDRLCDTMVQEVFELTGYDR
VMAYKFHEDDHGEVISEVTKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCQAKHV
KVLQDEKLPFDLTLCGSTLRAPHSCHLQYMDNMSSIASLVMAVIVNEEEGDGSHDSAPAQ
KKKRLWGLVVCHNTNPRFVPFPLRYACEFLAQVFAIHVNKELELENQIMEKNILRTQTLL
CDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKNKIWKLGVTPTEFQIHGIASWLSDYHM
DSTGLSTDSLHDAGFPGALALGDSVCGMAAVRITSKDVIFWFRSHTAGEIRWGGARHEPG
EKDDARRMHPRSSFKAFLEVVKTRSTPWKDYEMDAIHSLQLILRNAFSDVETTDANTNKG
MIHSKLSDLKLDGVQELEAVTSEMVRLIETATVPILAVDSDGSVNGWNSKIAELTGLPVD
EAIGQHLLALVEDSSVERVKRMLEMALEGTEEQNVQFEIKTHGSRLDNGPIRLVVNACAS
KDLQENVVGVCFVAQDLTAQKHVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCTEW
NPAMANLTGWKREEVIDKMLLGEVFGTQMACCRLKNQESFVNLGIVLNNTMTSQDSEKVA
FAFFTRSGKYIECLLCVSKKLDREGVVTGVFCFLQLASHELQQALHVQRLSKQTASKTLK
AIAYMKRQIKNPLSGIIFSRKMMEGTELGPEQRQILQTSAQCQLQLSKILDDSDPDSIIE
GYLDLEMTEFSLNDVLTASTSQIMMKSNGKSVRVTNETTEEVMNDTLYGDGIRLQQVLAN
FMIMSVSFTPPGGQLAVTASLRKDQLGQSVHLAYLEIRITHSGSGIPELLLNEMFGSDED
VSEEGMSLLISRKLVKLMNGDVHYLKQAGKCTFIITAELAAKNK
NT seq
3375 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcctcaaggccgagtcaggcttctggtaactccaggcgctccaggaacagcgcc
aggatcattgcacagaccactgtagatgccaagctccatgccgatttcgaggaatcggga
gattttttcgattactcgagctcagttcgtgtaactggtcctgccgccatggaggaagat
caaccattgaaatctgacaaggtgactacagcttaccttcatcacatacagaagggtaag
ctgattcagccctttggttgcttgctcgccttggacgagaagaccttcaaggtcatagct
tacagcgagaatgccccagagatgttgaccatggtcagccacgcagttcccagtgttggg
gaacaccctgttcttggcatagggacagacataaggactcttttcactgttcccagtgcc
tctgccttgcacaaggcccttggatttggagatgtttctctcttgaatcccattcttgtt
cactgcaaaacttctgcaaagcccttttacgcaattgtccacagagtgacagggagtatc
atcgttgatttcgaaccggtcaagccctcggaagttcccatgacagcagccggtgctctg
cagtcttacaagcttgcagccaaagcaataaccagactgcagtcattgtcgagcgggagc
atggacaggctttgcgacacgatggtccaggaggttttcgagctcacgggctacgacagg
gtgatggcctataaattccacgaagatgatcatggcgaggttatctccgaggttacgaaa
tccgggctggaaccatatctgggtttacattatccagccaccgatatccctcaagctgcc
cggttcttgttcatgaagaacaaagtcagaatgatagttgattgccaggcaaaacacgta
aaggtgcttcaagacgagaagctgccatttgatcttaccctttgtggctcaacccttagg
gcaccccatagctgccatctccagtatatggacaacatgagttctatcgcctctcttgtt
atggccgtgattgtgaacgaggaagaaggagatggcagccatgactctgcacctgcacag
aagaaaaagagactatggggtttggtggtttgccataacacaaacccgaggttcgttcca
tttcctcttaggtatgcctgtgagtttcttgcccaagtgtttgccattcatgtcaacaag
gagcttgagctggagaatcagatcatggagaagaacattttacgaactcaaacactatta
tgcgatatgctgatgcgtgatgcaccgttaggcatcgtgtcgcagagtccaaacataatg
gacctcgtgaaatgcgacggagcagcccttctgtacaagaacaagatctggaaactggga
gtaacgccaactgagttccagattcatgggatagcttcatggctgtctgattaccacatg
gattccactggtttgagcacagacagcttgcacgatgccggctttccgggggctctagcc
ctcggagactcagtgtgtggaatggcggctgtgaggataacttcaaaagacgttattttc
tggttcagatctcataccgcaggggaaataagatggggaggcgcaaggcatgaaccgggc
gagaaggatgatgcccggagaatgcacccaaggtcatctttcaaggctttccttgaggtg
gtcaagacgaggagtacgccatggaaggattatgaaatggatgccatccattccttgcag
ctcattctgaggaatgctttcagtgacgttgagacaactgatgccaacacaaataagggg
atgatccactcaaagctaagtgatctgaagctggatggtgtccaagaactggaagctgtg
acgagcgagatggtgcggttgatcgagacagccactgtcccgatcttggccgttgattct
gatgggtcagtgaatggctggaactccaaaatagcggagctaaccggtcttccagtcgat
gaagccatcggacagcatctactggcactcgttgaggattcttcggttgaaagagtgaaa
aggatgttggagatggcgttggagggaactgaggagcagaatgtgcagttcgagatcaag
acacacgggtcgaggctcgataacgggccgatacgtttagttgtcaacgcatgtgcaagc
aaagatctccaagaaaacgtggtcggagtgtgtttcgtggcacaagatctcaccgctcag
aagcatgtgatggacaagttcactcggattgaaggcgactacaaggccatcatccaaaat
ccaaacccgttgatccctcccatatttggtactgacgagttcgggtggtgcacagaatgg
aatccagcaatggcgaacttaaccgggtggaaacgagaggaagtcatcgataagatgctg
ttaggagaagtctttggaacacagatggcctgttgtcgtcttaagaaccaagaatccttt
gtgaacctcgggattgtcctgaataacaccatgaccagtcaggactccgagaaagtggca
tttgctttcttcacgaggagcggaaagtatatagagtgtttgctgtgtgtgagcaagaaa
ctggaccgggaaggtgtagtgaccggtgtcttctgtttcctgcaactcgcaagccacgag
cttcagcaagcccttcatgtccagcgtctgtctaagcaaactgcctcgaagacactgaaa
gcaatagcttatatgaaaaggcaaatcaagaatcctctgtccgggattatattttcaagg
aagatgatggagggcactgaactaggtccagagcagagacagattttgcagactagtgca
cagtgccagctgcaacttagcaagatcctcgatgattcagatcccgacagtatcattgaa
gggtacttggatctggaaatgacggaattcagcctgaatgatgttttgactgcttccaca
agccagataatgatgaagagcaacgggaaaagtgtccgagtaacgaacgagacgacagaa
gaagtaatgaacgataccttgtacggagacggcatcaggcttcaacaagtcttggccaat
ttcatgatcatgtctgttagttttacaccacctggagggcagctcgctgttacagccagc
ctcaggaaagaccaactgggtcaatctgtacatctcgcttatctggagatcaggattaca
cattcaggatctggaataccggaactgttgctgaatgagatgtttgggagcgatgaagat
gtgtcggaggaagggatgagtcttctgataagccgaaagctggtgaaactgatgaacgga
gacgtgcattacttgaaacaggccgggaagtgtactttcattatcacagctgaactcgcg
gctaagaacaaataa
DBGET
integrated database retrieval system