Tarenaya hassleriana (spider flower): 104820753
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Entry
104820753 CDS
T04125
Name
(RefSeq) protein PIR
KO
K05749
cytoplasmic FMR1 interacting protein
Organism
thj
Tarenaya hassleriana (spider flower)
Brite
KEGG Orthology (KO) [BR:
thj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
thj03019
]
104820753
Messenger RNA biogenesis [BR:
thj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
104820753
Factors involved in mRNA localization
Other mRNA localization factors
104820753
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FragX_IP
CYRIA-B_Rac1-bd
WASH-4_N
Motif
Other DBs
NCBI-GeneID:
104820753
NCBI-ProteinID:
XP_010549637
LinkDB
All DBs
Position
Unknown
AA seq
1282 aa
AA seq
DB search
MAVPVEEAIAALSTFSLEDEQPEVQGPAVMVSAERAATESPIEYSDVAAYRLSLSEDTKA
LNQLNTLIQEGKEMASILYSYRSCVKALPQLPESMKHSQADLYLETYQVLDLEMSRLREI
QRWQSSASAKLAADMQRFSRPERRINGPTVTHLWSMLKLLDVLVQLDHLKNAKASIPNDF
SWYKRTFTQVSAQWQDTDTMREELDDLQIFLSTRWAILLNLHVEMFRVNNVEDILQVLIV
FIVESLELDFALLFPERHILLRVLPVLVVLATTSEKDTEALYKRVKLIRLINIFKNDPVI
PAFPDLYLSPAAILKELSVYFQKFSSQTRLLTLPAPHELPPREALEYQRQYLIVNHIGSL
RAEHDDFTIRFASSMNQLLLLRSNDGADTEWCREVKGNMYDMVVEGFQLLSRWTARIWEQ
CAWKFSRPWKDAAESQETSGSYSDYEKVVRFNYSAEERKALVELVSYIKSVGLMLQRCDT
LVADALWETIHAEVQDFVQNTLATMLRTTFRKKKDLSRILSDMRTLSADWMANTKPENEL
QSSQHGGDDSRSNFFYPRAVAPTASQVHCLQFLIYEVVSGGNLRRPGGLFGNNGSEIHVN
DLKQLETFFYKLSFFLHILDYTATIGTLTDLGFLWFREFYLESSRVIQFPIECSLPWMLI
DHILDSQNSGLLESVLLPFDIYNDSAQQALVVLKQRFLYDEIEAEVDHGFDIFVSRLSET
IFTYYKSWAASELLDPSFLFALDNAERCSIQPVRFTALFKMTKVQLLGRTINLRSLIAQR
MNKLFRENLEFLFDRFESQDLCAIVELEKLIDVLKHAHELLSQELSIDSFSLMLNEMQEN
ISLVSFSSRLATQIWSEMQSDFLPNFILCNTTQRFVRSSKVPPTQKPSVPSAKPSFYCGT
QDLNAAHQSFARLHSGFFGIPHVFAVVKLLGSRSLPWLIRALLDHISDKITTLEPMISGL
QEALPKSIGLLSFDGGVTGCMRLIREQLNWGTKAELKSEVLRGIKEIGSVIYLMGLLDTV
LREVDTKRFMQTAPWLGLIPGADGQIVNAQDGDSPLINLFKSASSAIVSNPSCPNPSAFY
TMSKQAEAADLLYKANMNGGSVLEYTLAFTSAALDKYCSKWSAPPKTGFIDITTSKDFYR
IYGGLQIGYLEEITNPQSAHHDVLGDSIAWGGCTIVYLLGQELHFELFDFSYQVLNVAEV
EALSASHAHRSAQFVQGWEALLEAMKKARRLNNHVFSMLKARCPLEDKTACAIKQSGAPL
HRVRFDNTVSAFETLPQKGTVS
NT seq
3849 nt
NT seq
+upstream
nt +downstream
nt
atggcggttcccgttgaggaagcgatcgcagctctttccacattctccctagaggatgag
cagccagaagtccaaggacctgctgtcatggtgtcagctgaaagagctgcaaccgagagt
cccatagagtatagtgatgttgcagcgtatcggttgtctttatcagaagatacaaaagct
ctgaatcagctgaacacgcttatacaagaaggaaaggagatggcatcaattctatactcg
tatagaagttgtgtcaaagcgctgcctcagcttcctgaatctatgaagcatagtcaggct
gatttgtatctagaaacatatcaagtcttggatttagaaatgagtcgtttgcgtgaaatt
cagcgatggcaatcatctgcttcagccaaattagctgctgatatgcagcgcttttccagg
cctgaacggcggataaatggccctacagtcacacatctttggtcgatgcttaagttgctt
gatgtcttggttcagcttgatcatctaaaaaatgctaaagctagcattcctaatgatttc
tcttggtataagagaacattcactcaagtcagtgcccagtggcaggacactgatacaatg
agagaggagttagatgacttacagattttcctgagcacaagatgggctattttactcaac
ttgcatgttgagatgttccgtgtgaataacgtggaggacattctccaagttctcatagtc
ttcattgttgagtcactggagttggattttgcacttctatttcctgagaggcacattctt
ctccgtgtcctccctgttcttgttgtcttagcaacaacatctgagaaagatacagaggct
ctatacaagagggttaaactcatcagattgatcaacatattcaagaacgatcctgtgatt
cctgcatttccagatctctatctatctcctgctgcgatattgaaagaactgtcagtatac
ttccaaaaattttcatcacagactaggctgctgactcttccagcaccccatgagctccct
ccccgtgaagcattagaatatcagaggcagtatctgatagtcaatcacattggatctctt
cgtgctgagcatgatgacttcacaatccgatttgcatcatccatgaatcagttattgctg
ttgaggtcaaatgatggagcagataccgagtggtgtagagaggtcaaaggaaacatgtat
gacatggttgttgagggtttccaactattaagcagatggacagcacgcatctgggagcaa
tgtgcttggaaattctctcgcccatggaaggatgcggcagaatcacaggagacttctgga
tcatattctgactatgagaaggtggtcaggttcaattattctgcagaagaaaggaaagcc
ttggtagaacttgtgagctatataaaaagtgttgggttgatgctgcagcgatgtgacaca
ttagttgctgatgctttgtgggagacaatacatgccgaagtccaagattttgtccagaat
acattggccacaatgttgcgtactaccttccggaagaagaaagatctgtcaaggattctt
tctgatatgcgtacactatcagctgactggatggcaaataccaagcccgaaaatgagttg
caatcttcacaacatggaggtgatgacagcagatcgaacttcttttatcccagagcagtt
gccccaactgcgtcgcaggtgcattgcttgcagtttttgatatatgaggtggtctctggt
ggaaatctgaggaggccaggggggctctttggaaataatggctctgagattcatgttaat
gacttgaagcaattggagactttcttttataagctcagttttttcctgcacatattggat
tacacagcaactattgggacgttgaccgatcttggtttcctttggtttagagaattttac
ttagagtcatcacgagttattcagtttccaattgaatgctcgttgccatggatgttgata
gatcacattcttgattcacagaattcaggccttcttgagagcgttttgttaccttttgac
atttataacgactcggctcagcaagccctagttgtgctgaagcagagattcctatatgat
gaaattgaagctgaggtggaccatggttttgatatatttgtatcaagactctcagagact
atattcacttattataagagctgggcagcgagtgagcttcttgatccatcatttctcttt
gccttggacaatgctgaaaggtgctccatccagcctgtgaggtttacagcattatttaag
atgacaaaagtacagctgcttggtagaacaattaatctaagaagtttgattgctcaacgg
atgaataaacttttcagagaaaacctagagtttctatttgacaggttcgagtcccaggac
ctatgtgctatagtggaactggagaagctgatagatgtcctaaagcatgcccatgaattg
ctttctcaagaactctccatagattctttcagtctcatgttgaatgaaatgcaagaaaac
atttctctcgtgtcattttctagtcgacttgccacccagatttggtcagagatgcagagt
gatttcctaccaaacttcatactttgcaataccacacaacgatttgtcagatcatcgaaa
gttcctcctactcagaagccgtcagtgccttctgctaaacctagtttctattgtggcact
caagacttgaatgctgcccaccaaagttttgcacggttgcatagtggatttttcgggata
ccgcatgtatttgccgttgttaaactactcggttctagatctttgccctggcttataaga
gctttgctggatcacatatcagataagataacaacgctcgagccaatgatttccgggttg
caagaagcgttgccgaagtctatcggattgctttcttttgatggtggtgtcacaggttgt
atgagacttattagagaacagctgaactggggcacaaaggcagagctcaaatcagaagta
ctcagagggataaaggaaatcgggagtgtaatatatctgatgggacttcttgatactgta
ttgagagaggtagacacaaagcgattcatgcaaactgctccatggttgggattaatccca
ggtgcagatggacaaatagttaatgctcaagatggagatagccctctcatcaacctcttc
aaatcagcaagttccgcgattgtgtcgaaccccagttgccctaacccttccgctttctac
accatgtccaaacaggcagaagctgcagatcttctgtacaaggcgaacatgaacggtgga
agcgttctcgaatatacacttgcattcacaagtgctgcacttgacaaatattgtagtaaa
tggagtgctcctcccaagacaggcttcattgacatcacaacttcaaaggacttctaccgc
atctatggaggtcttcaaattggatacctggaggagataacgaacccgcagtcagcccat
cacgatgtcctaggggactccatagcctggggtggatgcaccatcgtatatttgcttgga
caggaactgcactttgagctatttgatttctcataccaagtcctaaacgtggccgaggtt
gaagccttatctgcttcccatgcacatagaagtgcgcagttcgtccagggatgggaggcg
ctgttggaggcgatgaagaaggcgaggaggctgaacaaccacgtgttctcgatgctgaag
gcgaggtgccctctggaagacaagacggcgtgtgccatcaagcagagcggtgctcccttg
caccgtgtcaggttcgacaacaccgtctctgcctttgagactcttccccagaaaggcacc
gtctcctga
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