Tarenaya hassleriana (spider flower): 104820882
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Entry
104820882 CDS
T04125
Name
(RefSeq) protein SMG9-like
KO
K18735
protein SMG9
Organism
thj
Tarenaya hassleriana (spider flower)
Brite
KEGG Orthology (KO) [BR:
thj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
thj03019
]
104820882
Messenger RNA biogenesis [BR:
thj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
104820882
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
NB-ARC
MMR_HSR1
RsgA_GTPase
AAA_16
MeaB
URGCP_GTPase
AAA_18
AAA_19
Dynamin_N
AAA_17
AAA_30
Motif
Other DBs
NCBI-GeneID:
104820882
NCBI-ProteinID:
XP_010549827
LinkDB
All DBs
Position
Unknown
AA seq
381 aa
AA seq
DB search
MAGSSAGGPSHLSAASPTPKILLAKPSVGPIAGKFGRGSAEDEAQHHRSRLPPVSSLNIL
SDSWDFHIDRFLPFLTENTDFTVVGVIGPPGVGKSTILNEIYGFDASSPGMLQPFAIQSE
EIRAMAKHCTIGIEPRISAERFILLDTQPVFSPSILAEMIKPDSSSSIPVLAGESLTAEL
AHEIMCIQLGILLTSICHILLVVSEGVHEDNMWHLMSTVDLLKHGIPDPSSPALSRLQSS
EIGPEKEFRDKLSEGSEYMATPVFVHTKLQDQDLSPKNILQLRKSLSQYFQSHSFTQGSR
GTEPTSFVIPSKTSRNQHESYMSAMWRLRDQVLSEKGASFGRAVSEREWLKNSVKIWEMV
KSSPAIADYSRMLQSSGLFRR
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atggctgggtcatctgccggtggtccgagtcatttgtcggcggcgtcgccaactcctaaa
attctgctcgcgaagccctcagtcggtccgatcgccggaaaatttggccgcggcagcgct
gaagatgaagcccaacatcatcgctcccgcctccctcccgtcagctccctcaatatactc
tccgattcttgggatttccacatcgatcgctttcttcctttcctgactgagaataccgat
ttcacggtggttggtgtgattggtcctccgggtgttggcaaatcgacaattctgaatgaa
atttatggctttgatgcgagctcccctggaatgctacaaccatttgcaatacagtctgaa
gagatcagagcaatggcgaaacattgtacgattggcattgaaccgaggatttctgccgag
agattcatccttcttgatacccagcctgtcttcagtccatctattttggctgagatgatc
aaacctgatagctcatccagtattcctgtcttggctggcgaatctttgactgctgagttg
gctcatgaaataatgtgcatccagctgggtatcctcttaacatctatatgtcacatcttg
ttggtggtgtctgagggagttcatgaagataacatgtggcatctgatgtcaacggtggac
ttgttgaagcatggaatacctgacccgtcttcacctgctctttcacgtctacagagctct
gagattgggcctgaaaaggaatttagggataaactatctgagggcagtgagtatatggct
actcctgtatttgttcacacaaagcttcaggatcaagatcttagtccaaagaacatcttg
cagctaagaaagtcactgtctcagtactttcaatctcattcgtttacgcaaggaagcagg
ggaaccgagccgacttctttcgtgattccgtctaaaacctcgagaaaccagcacgagagt
tacatgtcagcgatgtggaggttgcgggatcaggtgttgtcagagaagggtgcttcgttt
ggaagggctgtgtcagaaagggagtggctgaagaactcagtgaagatatgggagatggtg
aagagttctcctgccattgcagattacagtaggatgcttcaaagctccggcctgttcagg
aggtag
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