Tarenaya hassleriana (spider flower): 104821088
Help
Entry
104821088 CDS
T04125
Name
(RefSeq) polyribonucleotide nucleotidyltransferase 2, mitochondrial
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
thj
Tarenaya hassleriana (spider flower)
Pathway
thj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
thj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104821088
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
thj03019
]
104821088
03016 Transfer RNA biogenesis [BR:
thj03016
]
104821088
Enzymes [BR:
thj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
104821088
Messenger RNA biogenesis [BR:
thj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
104821088
Transfer RNA biogenesis [BR:
thj03016
]
Prokaryotic type
tRNA degradation factors
104821088
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
DUF4330
T2SSB
Motif
Other DBs
NCBI-GeneID:
104821088
NCBI-ProteinID:
XP_010550151
LinkDB
All DBs
Position
Unknown
AA seq
960 aa
AA seq
DB search
MSAIASRATATALPNLLAWRALGFRTVCSGRLGFAPSNPEPPVSAGTKVLDTFKEEFEIG
SRVITLETGKIARFANGSVVLGMDETKVLSTITCAKTDSPRDFLPLTVDYQEKQFAQGVI
PSSYMRREGAPKERELLCGRLIDRPIRPLFPSGFYHEVQVMASVLSSDGKQDPDVLATNA
TSAALMLSDIPWGGPIGVIRIGRICGQFVVNPTMDELSSSDLNLVYACTRDKTMMIDVQA
REISEKDLAAALRLAHPEASKYLEPQIRLAEKAGKQKKEYKLSMISEKTLERVGDLAATR
IESIFTDPSYGKFERGEALDNIAQDVKKVFEEEGDEESLKVLPKAVDTVRKKVVRARMIS
DGFRVDGRHLDEVRPIYCEAGHLPALHGSALFSRGDTQVLCTVTLGAPGDAQSLDSVVGP
PKKRFMLHYSFPPFCTNEVGKRGGLNRREVGHGTLAEKALLAVLPPEELFPYTVRINSEV
MASDGSTSMASVCGGSMALMDAGIPLLHHVAGVSVGLITDVDPSNGEVKDYRIVTDILGL
EDHLGDMDFKIAGTRNGVTAIQLDIKPAGIPLDIICESLEHARKGRLQILDHMEREINVP
RPQDDVYSPRLATLRYTNDALRSLIGPMGSLKRKVEEETGARLSVGDGTLTIVAKNQTVM
EKVQEKIDFIIGREIEVGGIYKGTVTTIKEYGAFVEFNGGQQGLLHISELSHDSVSKVSD
VVSIGQQLSMMCIGTDVRGNIKLSLKAVLPRPASDTKNLVKESSPLPREMSDAGETAPSA
TNGKEGQKSSPKNSTKGKSPATPAVVIRSAAECDEAEKSACLDTNTENSTKPSKTVKQNR
KVKSASPKDDTLLSILSDSKLLTSAKAKITSQKDKQSESEAEDRSTSMNAQKLKIGTEVT
AKVSQVRTRGLVLDLGGGIRGMYKFEDEEETDFELGDTMRVKCTSFTGKGIPVMSLVEED
NT seq
2883 nt
NT seq
+upstream
nt +downstream
nt
atgtcagccattgcgagccgagcgacagccactgctctcccgaacttgctcgcatggcgt
gctttaggttttcgcacagtctgctctggccgcctcggattcgcgccgtccaacccggag
ccaccggtttcggcgggcaccaaagtcctggatacattcaaagaagaattcgagatcgga
tcacgtgttatcactctcgagacaggaaagatcgcgaggttcgccaacggttctgtcgtc
cttggcatggacgagactaaagttctttctaccatcacctgtgccaagaccgactcgcct
cgggatttcttgcctcttacagttgattatcaagagaaacaatttgctcaaggtgttatt
cctagttcatacatgcggagagagggtgcaccaaaggagcgggagcttttgtgtggccgg
cttatcgatcgacccatccgaccactctttccttcaggattttaccatgaagttcaggtt
atggcgagtgttctatcatctgacgggaagcaagatccagatgtattggcaactaatgca
acatcagctgctcttatgttatcagatattccatggggaggacccattggagtcatcaga
ataggaaggatttgtgggcagtttgttgtcaatccaaccatggacgagctcagctcaagc
gacctcaacttggtatatgcctgtacaagggataaaactatgatgatagatgttcaggct
cgtgagatctctgagaaagatctggcagctgctcttagactagctcatccagaggctagc
aaatatcttgagccccaaataaggcttgctgaaaaagctgggaaacaaaagaaggaatat
aaattgtcaatgatttctgagaaaactttggaaagagttggcgacttggctgcaactcgt
attgaatcaatctttaccgatccctcttatggcaagtttgaacgtggggaagcattagat
aacattgcccaagatgtgaagaaagtatttgaagaagagggtgatgaagaaagcttgaaa
gttctaccgaaggctgttgatacagtgaggaaaaaggtagttcgtgcaaggatgatatcg
gatggattcagagttgatggcagacaccttgatgaagtgaggcccatttactgtgaagct
ggtcatttgcctgcattgcatggatcagcacttttttcgcgtggtgatacgcaggtgctc
tgcactgttacgcttggtgccccaggagatgcacaaagtttggattccgttgttggtccg
cccaaaaaaagattcatgcttcactatagttttcctccattttgtacaaatgaggttggc
aaacgtggtggccttaataggcgtgaagttggtcatggaacgcttgctgagaaagcattg
cttgctgtcttgcctcctgaagagctttttccatatactgtacgtataaattcagaagtg
atggcctcagacggatccacatcaatggcaagtgtttgtggaggtagtatggcattgatg
gacgcaggaattcctctacttcatcatgttgcaggtgtttctgttggtcttatcactgat
gttgatccatcaaatggagaagtaaaagactaccgtatagtaactgatattttgggtctg
gaagatcatttgggagatatggatttcaagattgctggtacacgaaatggtgtgactgca
attcagttggatataaagccagctgggatccctttagacataatttgcgagtccttagaa
catgcacgcaaaggccgtcttcagattcttgaccacatggagcgagagataaatgttcca
cgaccccaggatgatgtttattctcctcgactagctacgttgagatacaccaatgatgct
cttcgcagcttgattgggcctatgggttctctcaagagaaaggttgaagaggagacaggt
gcaagattgtctgtaggggatggaacacttactatcgttgccaagaatcagactgtgatg
gaaaaggttcaagaaaagattgacttcataattggacgtgaaattgaagtcggtggtata
tataaaggtacagtaacaactattaaagaatacggcgcctttgtggagttcaatggtggt
cagcaagggttgctacatatttccgagttgtctcatgattctgtttccaaggtttctgat
gtggtatcaattggacagcagctctctatgatgtgcattgggacggatgtccgtggtaat
attaagttatccctcaaagcagtgttgcctcggccagcctcagacaccaaaaacctggtt
aaggagtcgtctccactccccagagaaatgtctgatgctggggagacagccccaagcgca
actaacggcaaagaggggcagaagtctagtccaaagaattcaactaagggcaagagtcca
gcaacaccagctgttgtcatccgaagtgctgctgagtgtgatgaggcagaaaaatctgcc
tgcttggatactaacactgaaaacagcacaaaaccctccaagacagtgaagcagaaccgt
aaggtcaaatccgcttctcccaaagatgacaccctcctttcgattctgtctgattctaag
ctattgacgtctgcaaaagcgaagataacatcccagaaagacaaacagtctgagagtgag
gctgaagaccgtagtacttccatgaatgctcagaagttgaaaataggaacagaggtgaca
gccaaggtcagtcaggttcgaacccgcggattagttcttgatttaggtggtggaatccga
gggatgtacaaattcgaggacgaagaagagacagattttgagttgggtgacacaatgcgg
gtgaaatgtacgagttttactggcaaaggaatacccgtcatgtctttggtcgaagaggat
tag
DBGET
integrated database retrieval system
