Tarenaya hassleriana (spider flower): 104821091
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Entry
104821091 CDS
T04125
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 14
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
thj
Tarenaya hassleriana (spider flower)
Pathway
thj03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
thj00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104821091
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
thj03041
]
104821091
03009 Ribosome biogenesis [BR:
thj03009
]
104821091
Enzymes [BR:
thj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
104821091
Spliceosome [BR:
thj03041
]
Complex A
U1 snRNP components
U1 related factors
104821091
Complex B
104821091
Ribosome biogenesis [BR:
thj03009
]
Eukaryotic type
Pre-60S particles
Helicases
104821091
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
WW
ERCC3_RAD25_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
104821091
NCBI-ProteinID:
XP_010550155
LinkDB
All DBs
Position
Unknown
AA seq
653 aa
AA seq
DB search
MLAMAVTATAAPTIRYAPEDPTLPKPWKGLVDGRTGYLYFWNPETNVTQYERPSCSAPPP
KPSTVSVSSSVQIQLSSSGQNRGYSPGNEDDKYSRGSDGGSKIDSLSRFTERPPYSQETS
SGLGNSAGGSSARGPPSAAAAGGGLSPEAYRRCHEITVTGDRVPPPLMSFEDAGFPPELL
REVYNAGFSAPTPIQAQSWPIALQSRDIVAIAKTGSGKTLGYLIPGFMHLRRVHNDSRMG
PTVLVLSPTRELATQIQDEAVKFGKSSRISCACLYGGAPKGPQLREIERGVDVVVATPGR
LNDILEMRRISLHQVSYLVLDEADRMLDMGFEPQIRKIVNEVPTKRQTLMYTATWPKEVR
KIAADLLVNPVQVNIGNVDELVANKSITQHVEVVAPMEKHRRLEQILRSQEPGSKIIIFC
STKKMCDQLARNLTRQFGAAAIHGDKSQSERDSVLSQFRTGRAPVLVATDVAARGLDIKD
IRVVINYDFPTGIEDYVHRIGRTGRAGATGMAFTFLGEQDAKHASDLIKILEGASQKVPP
QIREMASRGGGMNKFRRWGPGSGGRDGGRGRGHGDFGYGGRADSGYGGRGSWGSRDRSRS
PPMRSSSGWGRDRERSRSPERFGRGPSSSTARSPPRSFHEAMMTRGRLSPPRD
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atgcttgctatggctgttacagcaactgctgcgcctacaattcgatatgcacctgaagat
ccgactcttcccaagccatggaaaggtcttgttgatggtagaactgggtatttgtacttc
tggaatcccgagaccaatgttacccagtatgagagaccaagttgctcggctcctccaccc
aagccttctactgtctcggtaagctcttctgttcagattcaactatcttcttctggacaa
aaccgtggttacagtcctggcaacgaggatgataaatacagtaggggaagtgatggtggg
tccaagattgattctctatcaaggtttactgagagaccgccatactctcaagaaacctca
agtggactaggaaattctgcaggtggatcatcagccagaggacctccatcagctgcagcg
gcaggaggtgggctgtctccagaggcttatcgtcgatgtcatgaaataaccgttactgga
gatcgagtaccaccgcctttaatgtcttttgaagacgctggttttcctccagagcttctg
cgggaggtatacaatgcagggttctctgctccaactccaattcaagctcagtcatggcca
attgcgttgcaaagtagagacatagtagccattgctaaaacaggctctggaaaaacattg
ggttacttgattccagggtttatgcatctcagacgcgtccacaatgattcacgaatgggt
ccgacagttctggtgctgtcaccaacaagggagctggctacacagattcaagatgaagct
gtaaagtttggaaagtcatcgagaatttcttgtgcgtgtttgtatggtggagcacccaag
ggtcctcaactgagagaaatagaaagaggagtagatgttgtggttgcaacacctggacga
ttgaacgatatcctcgaaatgaggagaatcagcctgcatcaggtctcttatcttgtgctg
gatgaggcagatagaatgttagacatgggatttgagcctcagataaggaagatagtgaat
gaggttcccactaaacgccagacactcatgtacacagctacttggccaaaggaggtgagg
aaaattgcagctgacctcctcgtcaaccctgtccaggtcaacattggcaacgttgatgaa
cttgtggcgaacaagtccattacacagcatgttgaagtcgtggcaccaatggaaaaacat
agaaggctagagcagatattgaggtctcaagagcctggttcgaagatcataattttctgt
tcaaccaagaagatgtgtgatcaactagcacgcaatctgacccgccaatttggagctgct
gctatacatggggacaagtcccagagtgagagggacagtgttctgagtcagttccgcact
ggtagagctccggtgcttgtggcgactgatgttgctgctcgtggacttgacattaaagac
atcagggtggtcatcaattatgattttccaacaggaatagaagattatgttcatagaatc
gggaggactggaagggctggagcaactggtatggcgttcacattcttaggggagcaagat
gcaaagcatgcttcagatctgatcaagattctagaaggagcaagccaaaaagtccctccc
cagatacgtgaaatggcttctcgcggtggtggaatgaacaaattcaggcgttggggccct
gggtcgggaggtcgggatggaggtcgtggcaggggccatggtgatttcggctacggaggc
cgtgctgattctggttatggtggcagaggtagctggggttcacgtgacaggagcagaagc
cctccaatgagaagcagctcgggatggggaagggatcgtgaaaggagccgtagccccgag
agatttggaagaggaccatcatcttccaccgctcgttccccaccccgtagcttccacgag
gcaatgatgacacgtggcaggctctctccccctcgtgattga
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