Tarenaya hassleriana (spider flower): 104821579
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Entry
104821579 CDS
T04125
Name
(RefSeq) exosome complex component CSL4
KO
K07573
exosome complex component CSL4
Organism
thj
Tarenaya hassleriana (spider flower)
Pathway
thj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
thj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104821579
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
thj03019
]
104821579
Messenger RNA biogenesis [BR:
thj03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
104821579
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
104821579
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
ECR1_N_2
S1_RRP4
CHASE5
Motif
Other DBs
NCBI-GeneID:
104821579
NCBI-ProteinID:
XP_010550804
LinkDB
All DBs
Position
Unknown
AA seq
197 aa
AA seq
DB search
MKTAEQPEMVTPGEVLGKSTELKAGKGAYVPPGDNTIYASLTGIRRIVSPAPESDDLRPI
VEVVGHKAHGPVPEPDSVIIARVTKVMARMAAADIMCVGPKAVREKFTGIIRQQDVRATE
IDKVDMHLSFRPGDIVRAMVLSLGDARAYYLSTAKNELGVVSAESAAGEAMVPISWTEMQ
CPLSGQIEQRKVAKVGS
NT seq
594 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaccgctgagcaaccggagatggtgacaccgggagaggtacttggaaaatcgacg
gagcttaaagccggaaaaggtgcatacgtccctcccggagacaacacaatctacgcttcg
ctcaccggaatccgccgtattgtttcgccggctccggaatccgatgacctgaggccaatt
gtagaagttgtgggtcacaaagcacatggcccagttccagagcctgattctgttatcatt
gcgcgggtgactaaggttatggcacggatggcagctgctgatatcatgtgcgttggtccg
aaggctgtgcgtgaaaaattcactggcataatcaggcaacaagatgttagagctactgag
attgataaagttgacatgcatctatcgttccgtcctggagacattgttagagccatggtt
ttgtctctgggcgatgcacgagcttactatctctcaaccgctaagaatgaacttggtgtg
gtctcagcagagagcgctgcaggtgaagcaatggttccgataagttggacagagatgcag
tgtccattgtcaggccaaatagagcaaagaaaagttgccaaagtgggcagttga
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