Tarenaya hassleriana (spider flower): 104821684
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Entry
104821684 CDS
T04125
Name
(RefSeq) RNA polymerase sigma factor sigA
KO
K03086
RNA polymerase primary sigma factor
Organism
thj
Tarenaya hassleriana (spider flower)
Brite
KEGG Orthology (KO) [BR:
thj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
thj03021
]
104821684
Transcription machinery [BR:
thj03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
104821684
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
HTH_36
Lac_bphage_repr
NTF3_N
Motif
Other DBs
NCBI-GeneID:
104821684
NCBI-ProteinID:
XP_010550940
LinkDB
All DBs
Position
Unknown
AA seq
512 aa
AA seq
DB search
MMATAAVIGLSAGKRLLSSSFCHSDVTEKFLYGNDQSAVQYQIPHTKTVIISKKPSSNYS
PSLPSSTHRTQSAKAVKETLGVASSAPSSGQLWLQGYNDELEEESYDLDVEALLLLQKSM
LEKQWNLSFEKTISSDLSTKKTRKKISVTCSGISARQRRINAKKKNAMSQNKAVSHVSAT
KQQRIITNSELLRQNRVKGYVKGVISDAVLSHAEVVCLSKKIKSGLLLDEHKSRLKERLG
CEPSDDQLAMSLKISRAELQTRLMECHLAREKLAMSNVRLVMSIAQRYDNMGAEMSDLVQ
GGLIGLLRGIEKFDSSKGFRISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNA
KLRLEEKGITPSIERIAKSLNMSQKKVKNATEAVSKVFSLDRDAFPSLNGLPGETHHSYI
ADNRLENNPWHGYDEWALKNEVNKLLNAILGDREREIVRLYYGLDRESLTWEDISKRIGL
SRERVRQVGLVALEKLKHAARKRKMEAMLVKQ
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgatggccacggctgctgttataggactcagtgccggaaaaagactgttgagttcatca
ttttgtcactcagatgtcactgaaaagtttctatatggaaacgatcagagtgcagtgcag
taccaaattccccacacgaaaaccgtgataatttccaaaaagccatcgtcgaactatagc
ccgagccttccgtcctcaactcaccgcacacagtctgccaaggctgtgaaagagactttg
ggtgtggcttcttccgctccttcctctggtcaactttggttacaaggatacaatgatgag
ctggaagaggaaagttatgatcttgatgttgaggctcttctattgctacagaagtctatg
ttagagaaacagtggaatctttcgtttgaaaagacgatatcaagtgatttgtccactaag
aagaccaggaagaagatctcggttacttgttctggaatatcagcacgtcaaaggagaatc
aatgctaagaagaagaatgccatgtctcagaacaaagcagtttcacatgtcagtgctaca
aagcagcaaagaataataaccaattcggaattgcttcgtcaaaatcgtgtgaagggttac
gtgaaaggtgttataagtgatgcggtccttagccatgcggaagtcgtgtgcctttcgaag
aaaatcaaatctgggcttcttctagatgagcacaagtcaaggttgaaggaaagattgggt
tgtgagccttctgatgaccaacttgcaatgtcgttgaagatctctcgggctgaactacag
acacggttgatggagtgtcatctggctcgggagaaattggctatgagcaatgtccggttg
gtcatgtctatagctcaaagatacgataacatgggtgctgaaatgtctgatcttgttcag
ggtggtcttatcggacttttgcggggaatagagaaatttgactcttccaaggggttcaga
atttcaacttatgtgtattggtggatacgacagggtgtttcgagagcgttagtggaaaat
tcaagaaccttgaggttgcctactcacctgcatgagagattaggcttaatccggaacgca
aagcttagactggaagagaaaggaatcacaccttctatcgaaagaatagcaaaatctctg
aacatgtcgcagaagaaagtaaagaatgcgaccgaggcagtgagtaaagtattttctctc
gacagagatgcatttccttctttgaatggtctccccggagaaactcatcacagttacatt
gcggataatcgcttggagaacaatccatggcatggatatgacgagtgggcgttgaagaac
gaagtaaacaagcttctgaacgcaatactcggggatcgggagagagagatcgtccggcta
tactatggtctagacagagaaagtctcacatgggaagacataagtaaacgcattgggtta
tcgagagagagggtgagacaagtagggctagtggctttggagaagctgaagcatgcagcg
aggaagagaaaaatggaggctatgcttgtgaagcagtga
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integrated database retrieval system
