KEGG   Tarenaya hassleriana (spider flower): 104821724
Entry
104821724         CDS       T04125                                 
Name
(RefSeq) sm-like protein LSM4
  KO
K12623  U6 snRNA-associated Sm-like protein LSm4
Organism
thj  Tarenaya hassleriana (spider flower)
Pathway
thj03018  RNA degradation
thj03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:thj00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    104821724
  09123 Folding, sorting and degradation
   03018 RNA degradation
    104821724
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:thj03019]
    104821724
   03041 Spliceosome [BR:thj03041]
    104821724
Messenger RNA biogenesis [BR:thj03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     104821724
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     104821724
Spliceosome [BR:thj03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    104821724
SSDB
Motif
Pfam: LSM SM-ATX
Other DBs
NCBI-GeneID: 104821724
NCBI-ProteinID: XP_010550988
LinkDB
Position
Unknown
AA seq 136 aa
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY
IRGNTIKYLRVPDEVIDKVQEEKSRTDRKPPGVGRGRGGRGEGPGRVLGRGMDDGAARGR
GRGGPIGNKGGGRGRG
NT seq 411 nt   +upstreamnt  +downstreamnt
atgcttcctctttctttgctcaagactgcccaagggcatcccatgcttgtggagcttaag
aacggtgaaacctacaacgggcacttggtcaattgtgatacttggatgaacattcatctt
cgtgaagttatctgtacatcaaaggatggagaccggttttggaggatgccggagtgttac
atccgtggcaacacgattaaatatcttcgagttccagatgaggttattgataaagtgcaa
gaggagaagagccgcacagatagaaaaccgccgggagttggacgtggaagaggaggacgg
ggtgaaggtcctggaagggtacttgggcgtggcatggatgatggagctgccagaggccgt
ggcagaggaggtcctattggcaacaaaggaggcggccgtggacgtggttga

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