Tarenaya hassleriana (spider flower): 104821724
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Entry
104821724 CDS
T04125
Name
(RefSeq) sm-like protein LSM4
KO
K12623
U6 snRNA-associated Sm-like protein LSm4
Organism
thj
Tarenaya hassleriana (spider flower)
Pathway
thj03018
RNA degradation
thj03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
thj00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104821724
09123 Folding, sorting and degradation
03018 RNA degradation
104821724
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
thj03019
]
104821724
03041 Spliceosome [BR:
thj03041
]
104821724
Messenger RNA biogenesis [BR:
thj03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
104821724
mRNA degradation factors
5'-3' decay
Lsm complex
104821724
Spliceosome [BR:
thj03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
104821724
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
104821724
NCBI-ProteinID:
XP_010550988
LinkDB
All DBs
Position
Unknown
AA seq
136 aa
AA seq
DB search
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY
IRGNTIKYLRVPDEVIDKVQEEKSRTDRKPPGVGRGRGGRGEGPGRVLGRGMDDGAARGR
GRGGPIGNKGGGRGRG
NT seq
411 nt
NT seq
+upstream
nt +downstream
nt
atgcttcctctttctttgctcaagactgcccaagggcatcccatgcttgtggagcttaag
aacggtgaaacctacaacgggcacttggtcaattgtgatacttggatgaacattcatctt
cgtgaagttatctgtacatcaaaggatggagaccggttttggaggatgccggagtgttac
atccgtggcaacacgattaaatatcttcgagttccagatgaggttattgataaagtgcaa
gaggagaagagccgcacagatagaaaaccgccgggagttggacgtggaagaggaggacgg
ggtgaaggtcctggaagggtacttgggcgtggcatggatgatggagctgccagaggccgt
ggcagaggaggtcctattggcaacaaaggaggcggccgtggacgtggttga
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