Tarenaya hassleriana (spider flower): 104821768
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Entry
104821768 CDS
T04125
Name
(RefSeq) ERAD-associated E3 ubiquitin-protein ligase HRD1B-like
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
thj
Tarenaya hassleriana (spider flower)
Pathway
thj04120
Ubiquitin mediated proteolysis
thj04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
thj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
104821768
04120 Ubiquitin mediated proteolysis
104821768
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
thj04121
]
104821768
Enzymes [BR:
thj01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104821768
Ubiquitin system [BR:
thj04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
104821768
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4_3
zf-ANAPC11
zf-RING_16
zf-RING_11
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
104821768
NCBI-ProteinID:
XP_010551063
LinkDB
All DBs
Position
Unknown
AA seq
511 aa
AA seq
DB search
MIRLKLYAGLSLVATLAVVYHAFSSRGQFYPAMVYLSTSKISLVLLLNMCLVIMFSLWQL
VKCVFLGPLREAEIERLNEQAWRELMEILFAITIFRQDFSVVFLTMVVTLLLIKALHWMA
QKRMEYIETTPSVPMLSHVRIVSFLGFLLLLDGLFMYSSIRHLIQTRQASVSLFFSFEYM
ILATTTISIMVKYVFYVSDMIMEGQWEKKPVYTFYLELIRDLLHLSMYICFFLVIFMNYG
VPLHLIRELYETFRNFKIRVADYLRYRKITSNMNDRFPDATPEELNANDATCIICREEMT
TAKKLICGHLFHVHCLRSWLERQHTCPTCRALVVPPENGTSAATGQRGSHQDSPQQGASS
SGSQSSSVTASSDSLSRHQARLQAAATAASIYGKSFVYPSANTLMWSPGYSLVPQTGLPG
SSEGAEQQVSFQSFPHGFLPFQLPGYVAPGENSDANPEISEAQLEAQRKFLQSQIEVLQH
RLRLLEKSESADSRVGIDKDAKGKSVMETDE
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atgattcgacttaagctttacgcgggtctcagtttggttgcaaccttggctgtggtttac
catgcttttagcagcagaggtcaattttacccggcgatggtgtatttgtcgacgtctaag
ataagcttggtacttcttctcaacatgtgtctggtcatcatgttcagtctctggcaattg
gtcaaatgcgtgtttctgggtccccttagagaagccgagatcgagaggctgaatgagcaa
gcttggagagagctcatggagatactctttgccatcaccattttcagacaggacttctct
gttgttttcctcaccatggtcgtcactcttttgttgatcaaggctttgcattggatggct
cagaaaagaatggagtacatcgagactactccttctgtacctatgctgtcacatgttcgc
atagtctctttcttgggtttcctcctcctcctagatggcctctttatgtacagttctata
aggcacttaattcaaacacggcaggcttcggtttctctgttcttctcatttgagtatatg
atactggcaacaacaactatttcgattatggtaaagtatgttttttatgtcagcgatatg
attatggaaggtcaatgggaaaaaaagccagtgtatacgttctatctggagcttattcgc
gacctgcttcacttgtctatgtatatctgcttcttccttgtgatattcatgaactatggt
gttcccttgcacttgatacgggagctctacgaaacgtttagaaatttcaagattcgtgtt
gctgattacctccgctatcgtaaaatcacttccaacatgaatgataggtttcctgatgca
acccctgaagaactcaatgctaatgatgctacctgtatcatatgccgtgaagaaatgacc
actgctaagaaacttatatgcgggcatctgtttcatgtccattgcctacggtcatggttg
gagcggcagcatacatgccctacatgcagagcattggttgtacctcctgaaaatggcaca
tcagcagccactggccaacgtggatcacaccaagattctcctcagcagggtgcttcaagt
tcgggtagtcagtcgtcttctgttactgcttccagtgatagtttgagcaggcaccaagcc
aggcttcaagctgctgccactgcagcctccatatatggaaaatcctttgtttatccatct
gcaaacacactaatgtggtctccgggttattccttggttcctcaaactggtttacctggt
tcctcagaaggtgcagagcagcaagtgtctttccagtcttttcctcatgggtttctgcca
tttcagctgcctgggtatgtggctcccggagaaaattcagatgcgaatccagagatttca
gaggctcagctggaagctcagagaaaattccttcaatcccagattgaggtgttacaacac
agacttcgacttcttgagaagtccgaatccgcagattcccgagtaggaatcgataaagat
gcaaaaggaaagtcggtcatggagacggatgagtga
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