Tarenaya hassleriana (spider flower): 104822346
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Entry
104822346 CDS
T04125
Name
(RefSeq) probable ubiquitin conjugation factor E4
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
thj
Tarenaya hassleriana (spider flower)
Pathway
thj04120
Ubiquitin mediated proteolysis
thj04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
thj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
104822346
04120 Ubiquitin mediated proteolysis
104822346
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
thj04121
]
104822346
Enzymes [BR:
thj01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104822346
Ubiquitin system [BR:
thj04121
]
Ubiquitin ligases (E3)
U-box type E3
104822346
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ufd2P_core
U-box
DUF5770
Motif
Other DBs
NCBI-GeneID:
104822346
NCBI-ProteinID:
XP_010551829
LinkDB
All DBs
Position
Unknown
AA seq
1038 aa
AA seq
DB search
MATNKPQRSPEEIEDIILRKIFLVTLIDSTDADSRVVYLEMTAAEILSEGKELRLSRDLM
ERVLIDRLSGNFPAAEPPFPYLVGCFRRADDESKKIQSMKDKNLRSDMETVTRQAKKLAV
SYCRIHLANPDLFGNSDKASVGPDKRPKKSLSPLLPLIFADVSSGSLDMFGGSSSSVRCP
PGFLDEFFKDSDFDSLDPILKELYEDLRSNVIDTSVLGDFQPPLRALKYLVSLPVGAKSL
VSHEWWIPRGAYMNGRAMELTSILGPFFHISALPDNSLFKNQPDVGQQCFSEASSRRPAD
LLSSFTTIKNFMNILYSGLHDVLLVLLKSTDTRESVLQFLAEVINANAARAHIQVDPIYC
ASSGMFVNLSAVMLRLCEPFLDPHLTKRDKIDPKFVFYGNRLKLSELTALHASSEEVSEW
INKDNPEKVNGSGQESEGESRLLQSQEATSSRSNASGHLQNAKSTGKYTFICECFFMTAR
VLNLGLLKALSDFKHLVQDISRCEDTLATLKGMEVQAPSPQLKLDIARLEKEIELYLQEK
LCYEAQILRDGDFIQRALSFYRLVVVWLVGLVGGFKMPLPSTCPMEFACMPEHFVEDAME
LLIFASRIPKALDGVILDDFMNFIIMFMASPEYIRNPYLRAKMVEVLNCWMPRTSGSTAT
STLFEGHQLSLEYLVRNLLKLYVDIEFTGSHTQFYDKFNIRHNIAELLEYLWQVPSHRNA
WRQIAKEEEKGVYLNFLNFLINDSIYLLDESLNKILELKQLEAEMANTAEWEQRPAQERQ
ERTRLFHSQENIIRIDMKLANEDVSILAFTSEQITAPFLLPEMVERVANMLNYFLLQLVG
PQRKSLTLKDPEKYEFRPKQLLKQIVRIYVHLARGDSENIFPTAISSDGRSYNEKLFSAA
ADVLRKIGEDGKIIQEFIELGAKAKAAASEAMDAEAALGEIPDEFLDPIQYTLMRDPVIL
PSSRITVDRPVIQRHLLSDNHDPFNRAHLTADMLIPNTELKAKIMAFVKSHESQRRRGGE
EESKEERILTTSSDMLID
NT seq
3117 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgaacaagcctcagagatcaccggaggaaatcgaggatataatcctccggaag
atttttctcgttaccctaatcgattccacagatgcggattctcgagtagtttacttggag
atgacggcggcggagattctcagcgagggcaaggagctgaggctctctcgggatttgatg
gagagggtgctcatcgatcggctctccggcaactttcccgccgctgaaccaccgtttccc
taccttgtcgggtgcttccgccgagccgacgacgaatcgaagaaaatccagtcgatgaag
gacaagaatctaagatcggacatggaaacagtgaccaggcaggcgaagaaacttgctgtt
tcttattgccggatccacttggcgaatccggacctgtttggaaactcggataaggctagc
gttggtccggataagaggccgaagaagagcctctcgccgctgcttccgttgatcttcgcc
gatgttagttcgggatcattggacatgttcggcggcagtagcagcagtgttcgttgtcct
cctgggttcctggacgagttcttcaaggactccgatttcgacagcttggacccgattctg
aaggaactgtacgaggacttgaggtctaacgtgatcgatacatcagtgctcggagatttc
cagccgccattgagggctctcaagtatttggtaagcttgccagtaggagctaaatctttg
gtcagtcatgaatggtggattccaagaggagcttatatgaacggccgagccatggaattg
acaagcattcttggccctttcttccatattagtgcattgccagataattccctcttcaag
aatcaaccagatgtggggcagcaatgtttctctgaagcatcaagtcgccgacctgctgat
ttattatcctcattcaccacgataaagaattttatgaatattttatatagtgggcttcat
gatgtactccttgttctgcttaaaagcaccgatacccgtgagagtgttttacagtttctt
gcagaggtgatcaatgcaaatgctgcaagagctcatattcaggttgatccgatttattgt
gcgagctcaggcatgtttgttaacctcagtgctgtcatgctccggctgtgtgagcccttc
ttagacccacatttaacaaaaagggataagattgacccgaaatttgtattctacgggaat
cgtttaaaattaagtgagttgactgctctgcatgcatcatccgaagaagtttctgagtgg
attaacaaggataatccagaaaaagtcaatggttcaggacaagaaagcgagggtgaaagt
cgcttgttacaatcccaggaagccacaagttccagaagcaatgcttctgggcatctgcaa
aatgcaaagtcaactggcaaatacactttcatttgtgaatgcttctttatgactgcaagg
gtccttaacttgggtctcttaaaagcattatctgacttcaaacatcttgttcaggacatc
tcgagatgcgaggacaccctcgcaacactaaaaggcatggaagttcaagcaccttctcca
caattaaagctcgatatagctcgattagaaaaagaaatagagttgtatttgcaggaaaag
ctttgctatgaggcccaaatcttaagggatggagattttattcagcgtgcattgtcattc
taccggttagtggtggtttggttagttggactagttggtgggttcaagatgcctttgcca
tcaacttgccccatggaatttgcctgtatgcctgagcattttgttgaagatgcaatggag
ttattgatatttgcctcaaggatccccaaagctttggatggggtgatactggacgacttc
atgaacttcattatcatgttcatggctagtccagaatatatcagaaatccttatcttaga
gcgaagatggtcgaagtgctgaactgctggatgccccgaacaagtggttcaactgctaca
tctactctgttcgagggccatcagttatcgcttgagtatcttgtcaggaacttgttgaaa
ctatatgttgacattgagttcactggttctcacactcagttctatgacaagttcaatatt
cgccacaatattgccgagctgctggaatatctgtggcaagtgcctagccaccgtaatgct
tggagacagattgcaaaagaggaggaaaagggcgtgtacttgaacttcttaaacttcttg
atcaacgacagcatctaccttctagatgaaagtcttaacaaaattctcgagcttaaacaa
ctcgaggctgagatggcaaatactgcagagtgggagcagagacccgctcaagagagacag
gagagaacaagactcttccattctcaggagaatattatcagaattgatatgaagttagcg
aatgaagatgtgagtatactcgcgtttacgtctgagcagatcacggccccttttctgctt
cctgagatggttgaaagggttgctaacatgcttaactacttcttgctacaactcgtgggt
ccgcaacgtaaatctttgaccttgaaggatcctgagaagtatgaattccgtccaaagcaa
ttgcttaagcagatcgttcgtatatatgttcatcttgcaagaggagactcagaaaacata
ttcccaactgccatctccagtgatggccgatcatataatgaaaagttgtttagtgcagca
gcagatgtacttaggaaaattggtgaggatgggaaaatcatacaagagttcatagaactg
ggtgcaaaagccaaggctgctgcttccgaggccatggacgctgaagctgcgcttggagag
ataccagacgaattcctcgatccaattcagtacacgttgatgagagatccggtgatactt
ccgagttcaagaatcacagtggacagacctgtcatccagaggcatcttcttagcgacaac
cacgatccgttcaaccgggcacacctgacggcggacatgctgatacccaacaccgagctg
aaggcaaagatcatggcgttcgtcaagtcccatgaatctcagagacgcagaggaggagaa
gaagagagcaaggaggagagaatacttaccacaagcagcgacatgttgatcgattga
DBGET
integrated database retrieval system
