Tarenaya hassleriana (spider flower): 104823803
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Entry
104823803 CDS
T04125
Name
(RefSeq) ERAD-associated E3 ubiquitin-protein ligase HRD1B-like isoform X1
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
thj
Tarenaya hassleriana (spider flower)
Pathway
thj04120
Ubiquitin mediated proteolysis
thj04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
thj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
104823803
04120 Ubiquitin mediated proteolysis
104823803
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
thj04121
]
104823803
Enzymes [BR:
thj01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104823803
Ubiquitin system [BR:
thj04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
104823803
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_SYVN1_N
zf-RING_2
zf-rbx1
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4_3
zf-ANAPC11
zf-RING_Vps41
DUF6965
zf-RING_11
zf-RING_16
zf-RING_5
FAR1_N
Motif
Other DBs
NCBI-GeneID:
104823803
NCBI-ProteinID:
XP_010553833
LinkDB
All DBs
Position
Unknown
AA seq
518 aa
AA seq
DB search
MSICILSSSTQRGHNSRILSLGRDFFFSARRSGGETMIRLRVYAGLSLFATLAVVYHAFS
SRGQFYPAMVYLSTSKISLVLLLNMCLVIMFILWKLVKCVFLGPLREAEIERLNEQAWRE
LMEILFAITIFRQDFSVVFLAMVVTLLLIKALHWMVQKRMEYIETTPSVPTLSHVRIVTF
LGFLLLLDGIFIFSSLRHLIQTRQASVSLFFSFEYLIMATTTVSIMVKYVFYVSDLIMEG
QWEKKPVYTFYLELIRDLLHLSMYICFFVVIFMNYGVPLHLIRELYETFRNFKIRVADYL
RYRKITSNMNDRFPDATPEELIVNDATCIICREEMTTAKKLICGHLFHVHCLRSWLERQH
TCPTCRALVVPPENGTSAATGQHGSRQDSPQQRTGASSSDGQPSSVAASSDNLSRHHARL
QAAASAASIYGKSFVYPSANTLAWSPGYSAVPQAGIPGSDANPEISEAQLVEDQRKFLQS
QIEVLRNQLRLLEKPEFKDSAAANGNDAKGKSIVETAE
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atgtcaatctgcatcctttcttcttcaacgcaacgaggacataactctcggattctctcg
cttggacgtgatttcttcttttccgcgcgaagaagcggcggagagacaatgattcgactt
agggtttacgctggccttagtttgttcgcgaccttggctgtggtttatcatgcttttagc
agcagaggtcaattttacccggcgatggtgtatctgtcgacatctaagatcagcttggtg
cttcttctaaacatgtgtttggtcattatgttcattctatggaaattggtcaaatgtgtg
tttctgggtccccttagagaagccgagatcgagaggctgaacgagcaagcttggagagag
ctcatggagattctcttcgccatcaccattttcagacaagacttctctgtcgttttcctc
gccatggtcgtgactcttttgttgatcaaggctttgcattggatggtccagaaaagaatg
gagtacatcgagactactccatctgtgcctactctgtcacatgttcgtatagtcactttc
ttgggtttcctcctcctcctagatggtatctttattttcagttctttgcggcacttgatt
caaacacggcaggcttcggtttctctcttcttctcatttgagtacctgataatggcaaca
acaactgtttcgatcatggtaaaatatgttttctatgtcagcgatttgattatggaaggt
caatgggaaaaaaagccagtatatacattctacctggaacttatccgagacctgcttcac
ctgtctatgtatatctgcttcttcgttgtgatattcatgaactatggtgttcccctgcat
ttgatacgggagctctacgaaacttttagaaacttcaaaattcgtgttgctgattacctt
cgatatcgtaaaatcacttctaacatgaacgataggtttcctgatgctactcctgaagaa
ctcattgtaaatgacgctacctgtatcatatgccgggaagaaatgactactgcaaagaaa
cttatatgcgggcatctgtttcatgtgcattgtctgcggtcatggttggagcgccagcac
acatgtcctacatgcagagcgcttgttgttcctcctgaaaatggtacatcagctgccacc
ggacaacatggatcacgccaagattctcctcagcagagaacaggtgcttcaagttcagat
ggtcagccttcttctgttgctgcttccagtgataatttgagcaggcaccatgccaggctt
caagctgctgcttctgcagcttccatatatggaaaatcatttgtttatccatcagcaaac
accttagcctggtctccgggctattccgcagttcctcaggcgggtatacctggttcagat
gccaatcccgagatctcagaggctcagctggtggaagaccagaggaaatttctccagtcc
cagattgaggtgttacgaaaccaattacgtcttcttgagaaacccgaattcaaagattcc
gcggcagcaaacggtaacgatgcaaaaggaaaatcgattgtggagacggccgaatga
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