KEGG   Tarenaya hassleriana (spider flower): 104823841
Entry
104823841         CDS       T04125                                 
Name
(RefSeq) THO complex subunit 4D-like
  KO
K12881  THO complex subunit 4
Organism
thj  Tarenaya hassleriana (spider flower)
Pathway
thj03013  Nucleocytoplasmic transport
thj03015  mRNA surveillance pathway
thj03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:thj00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    104823841
  09122 Translation
   03013 Nucleocytoplasmic transport
    104823841
   03015 mRNA surveillance pathway
    104823841
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:thj03019]
    104823841
   03041 Spliceosome [BR:thj03041]
    104823841
Messenger RNA biogenesis [BR:thj03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     104823841
    TREX complex
     104823841
Spliceosome [BR:thj03041]
 Complex C
  Other components
   EJC/TREX
    104823841
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    104823841
SSDB
Motif
Pfam: RRM_1 FoP_duplication
Other DBs
NCBI-GeneID: 104823841
NCBI-ProteinID: XP_010553890
LinkDB
Position
Unknown
AA seq 277 aa
MSGSLNMTLDDMVKRSRNERSGARGRSRRGRGANIFSSGGRGIGPARRGPLAVNARPSSF
SINKSVRRVRNLPWQNDLFEESLRAAGVSGVDVGTRLYITNLDRGVINEDIRELFAEMGE
LKRYAIHYDKFGQPSGSAEVVYIRRTDAFQALKKYNNVLLDGKPMRIEMADSNTEVSVAA
RVNVTGLNGRMKRTVAMGQGAVGRGRGRGRGRETFKRIPIQSQRRGGGGRGGIGAARGRG
RGQGGGTGGRGKKPVEKSAEELDKDLDNYHAEAMNTS
NT seq 834 nt   +upstreamnt  +downstreamnt
atgtctggatccttgaatatgactcttgatgatatggtcaagaggagtaggaatgagagg
tctggggcacgagggaggtctcgccgtggccgtggagcaaacatattttccagtggtgga
agaggaattgggcctgctcgtagaggtcctcttgctgtcaatgctcggccatcatctttc
tcgataaacaagtctgtccgcagggttaggaacttgccatggcagaacgatttgtttgaa
gaaagtctgagagctgcaggcgtatcaggagttgatgtcggtacaaggctctacattacc
aacttggatcggggagtgatcaatgaagatataagggagctctttgcagagatgggggag
ctaaaaagatacgcaattcattatgacaaatttgggcaaccgagcggctcggcagaagta
gtgtacatcagaagaacagatgctttccaagctctgaagaaatacaacaacgtgctattg
gatggaaagccgatgagaatagagatggcggattccaacacagaggtgtctgtcgccgct
cgggtgaatgtgaccggtctgaacggaaggatgaagaggactgtcgccatggggcaagga
gcagtaggaagaggaagaggtagagggaggggtagagagactttcaagcgcatcccgatc
caaagccaaagaagaggaggcggcgggcgaggtggcattggggctgccagaggcagaggc
agaggacagggtggaggaaccggaggacggggaaagaagcctgtcgagaaatcggctgag
gaactcgacaaagatctcgacaattatcacgcagaagcaatgaacacctcttaa

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