Tarenaya hassleriana (spider flower): 104824249
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Entry
104824249 CDS
T04125
Name
(RefSeq) E3 ubiquitin-protein ligase SHPRH
KO
K15710
E3 ubiquitin-protein ligase SHPRH [EC:5.6.2.-
2.3.2.27
]
Organism
thj
Tarenaya hassleriana (spider flower)
Brite
KEGG Orthology (KO) [BR:
thj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
thj04121
]
104824249
Enzymes [BR:
thj01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104824249
Ubiquitin system [BR:
thj04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
104824249
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
SHPRH_helical-1st
Helicase_C
SHPRH_helical-2nd
PHD_5
PHD
RING_XB3-XBAT31
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
104824249
NCBI-ProteinID:
XP_010554570
LinkDB
All DBs
Position
Unknown
AA seq
1754 aa
AA seq
DB search
MGRRKQSKPRRSVGSITQANGESDEKEVAVAEGSGQKDFVDIDKPYYVNICSTHPVSEQH
LDISEVVLMNLSLRERFCSCRSLDDVFQCPDYSLRFRVCNVSQFVDRIKLGHWPVLSSGD
VTLELIDKKVSDDAEADSVVWSAGFDGPGEGVSGLVHLSSLEFLTLRLLPGLQGLSSPRV
RVEMLQKAFDSCDSLLDNTRQVWKKSMMNVIFWLRPEMMTSEVRYGTKLNATETEMSQVT
EAETSHSNKQPRFDVAAFYEAIKPSKMDATLGDDIPDLLPALRPYQRRAAYWMVQREKGD
PVQLTEEESPFSPLCIPVGFLDSTSKMFYNPFSGNISLVPEYFSPQILGGILADEMGLGK
TVELLACIFSNRKPAKDGISESNISSVPDEQKISLKRLKRERVECICGAVSESRKYKGMW
VQCDICDAWQHADCVGYSPKGKVKKHNQDIDGKVSPKRRKEGPMKIEVREGEYTCKMCSE
LLQVTVSPIPTGATLIVCPAPILPQWHSEITRHTRLGSLVTCVYEGVRSASLSEAPMVDI
SELVNADIILTTYDVLKEDLSHDFDRHDGDRHVLRFQKRYPVIPTPLTRIFWWRICLDEA
QMVESNAAAATEMALRLYTKHRWCITGTPIQRKLDDLYGLLRFLKASPFDVSRWWSEVIR
DPYERQDTKAMDFTHKIFKQIMWRSSKLHVADELQIPPQEECVSWLTFSAIEEHFYSRQH
ETCVSYAREVIETLKQDILKRGQKFSDNPLITHTEAAKLLNSLLKLRQACCHPQVGSSGL
RSLQQTPMTMEEILMVLVKKTQTEGEEALRTLIVALNGLAAVAMLKLEFSQAVGLYNEAL
NITNQHSEDFRLDPLLNIHILHNLAEILPTVKSYEGKVPALGSLKKAVDSADDDQNSAKR
QRVNEPENLGPVPQRTAQHCASCVPENGLKEDEECQALKLGCQTLKAKYLSGFYSKLSAA
QQEGLGKTVELLACIFSNRKPAKDGISESNISSVPDEQKISLKRLKRERVECICGAVSES
RKYKGMWVQCDICDAWQHADCVGYSPKGKVKKHNQDIDGKVSPKRRKEGPMKIEICDALS
DMGKQHSNWWLDALQLAGQNKDFAAELTRKIEEAIHGNLNNSSSSRTTSHFRTIHGMKFH
LQTFMDTLEGSRKRVIDRLLEIDQTMEKPNIEDIERITNCKYCQKKDDGPLCLHCELDEL
FQEYEARLFRLNRSRRGVMESASVEEMVDMQKKKSALNLFFSGLSSRNKDLNSSNDGDTE
PTKRNSGDIVIVSKSPSEMEIALGVIRTHCKTYLDREGKLTATKHMQMLEWMRKEYAHAR
ALSRAQAQLLRAYDEIKMATMRLQLREFEDDTQIYALSLDELDAASVQNTNDKFLALSSL
LSTKGKFRYLKELMKSKQKQESEIPDQQSSLTPEVKVPSSIEQKSEGLLKPEEACPICHE
NLWNQKMVFQCGHTTCCKCFFAMTESRSGHDTQQKWVMCPICRQHTDVGNIAYADDRRNN
GFNSSTDEDYKEDEASFVVQGSYGTKVEAVTRRILWIKSTDPEAKVLVFSSWNDVLDVLE
HAFTGNGITFIRMKGGRKSQTAISKFRGETQNQKRNPHKKEPRSIQVLLLLIQHGANGLN
LLEAQHVIMVEPLLNPAAEAQAVSRVHRIGQDKPTLVHRFLVKGTVEESIYKLNTSRNVN
SSSNSFISGNTKNQDQPFLTLRDLESLFSSTSAPDTGDNWDQTNLRDLPPSVAAAMAAER
RLTENAAASSSTLS
NT seq
5265 nt
NT seq
+upstream
nt +downstream
nt
atgggtaggagaaaacaatccaaaccgcgccgttcagtgggttcgattactcaagctaat
ggagagtctgatgagaaggaagtagctgttgctgagggttcagggcaaaaggactttgta
gatatagataagccatattatgtcaacatatgttctactcatccagtttcagaacagcat
ttggatatatctgaagttgttctgatgaatttaagtttaagagaacgtttctgcagttgc
cgttcgcttgatgatgttttccagtgccctgattattccttgaggtttcgggtgtgcaac
gtgagtcagtttgttgatcggattaagcttggccactggccggttctctcctctggtgat
gttacccttgaattgatagataaaaaggtgtctgacgatgcagaggctgactcagtggtt
tggtcggcgggttttgacggtccaggtgaaggtgtttcaggtcttgtccatctttcaagt
ttggagtttttgacattaaggttattgccgggtcttcaggggctgtcttctcctagagtt
agagttgagatgcttcagaaggcctttgattcttgtgattcgcttcttgacaacacgaga
caagtatggaagaagagtatgatgaatgtcatattttggctgcgcccagagatgatgaca
tcagaggtcagatacgggacaaaattaaatgcgacagaaactgagatgtcacaagtgacg
gaagctgaaacttctcactccaataaacagccaagattcgatgttgctgcattttatgaa
gccataaagccatcaaagatggatgcgacgcttggagatgacatccctgatttgcttcca
gcccttaggccataccagcggcgtgcagcatattggatggtgcaacgagagaaaggagat
cctgtacaattgacagaggaggagagcccattttctcctctgtgtatccctgttggattc
ctcgactctacttcaaaaatgttctataacccattcagtgggaatatctcattggtacca
gagtatttttcacctcaaatcttgggcggtatcctggctgatgaaatgggtctgggaaaa
acggttgagctgcttgcttgcatcttctctaatcggaaaccagccaaagatggaatatct
gaatctaatatatcatcagttcctgatgagcagaaaattagcctgaaaagattgaaaagg
gaacgtgttgagtgcatatgtggagctgtgagtgaaagtcgcaaatacaagggaatgtgg
gtgcaatgtgacatatgtgatgcttggcagcatgcagactgtgtaggttattcccccaaa
gggaaagttaagaagcataaccaagatatagatggaaaagtatcaccaaagagaaggaaa
gagggtccaatgaaaattgaagttagagaaggggaatatacttgcaaaatgtgctccgaa
cttctacaagtcactgtctctcccatcccaacgggtgctactcttattgtctgtccagct
cctatattaccccagtggcattcagagattacacgtcatacgcgcttgggttcccttgta
acatgtgtgtatgaaggtgtgaggagtgcctcactctctgaagctcctatggttgacatc
agtgaacttgtcaatgctgacatcattttaactacatatgatgtgctgaaagaggacttg
tcacatgacttcgacaggcatgatggtgatcggcatgttcttagattccagaaaaggtac
ccagtcattcctactccactaaccagaatattctggtggaggatttgcttggatgaggcc
caaatggtagaaagcaatgcagctgctgcaacagagatggcgctgagattatatactaaa
catcgttggtgtatcaccggaactcctatacaacgcaaacttgatgacttatatggacta
ctaagattccttaaagcaagtccttttgatgtttcaagatggtggagcgaagtgataaga
gacccatatgagaggcaagacacaaaggccatggacttcacacataaaattttcaaacag
attatgtggcgttcatcaaagctccatgttgctgatgagttgcagattccacctcaagag
gaatgtgtctcttggctgacgttttcggcaatcgaagagcatttctatagcagacagcat
gaaacttgtgtgagttatgcccgtgaagttatagaaactttgaaacaagatattctcaaa
agaggtcaaaaattttctgataatcctttgatcacgcacacggaagccgcaaaattattg
aattctctcttgaagttacgtcaagcttgctgccatcctcaagtagggagttctggttta
cgttctttgcagcaaactccaatgactatggaagaaatcctaatggttcttgtgaagaag
acccagacagagggagaagaggcgctaagaacattaattgttgctttaaatggtcttgca
gcagttgccatgcttaagctagaattttctcaagcagtaggattgtacaacgaagcatta
aatataactaatcagcactctgaagattttcgtcttgatccgttgttgaatattcatatt
cttcacaatctagctgagatactgcccacggttaaaagctacgaagggaaagttcccgca
ttaggaagtcttaaaaaggcagtagattcagctgatgatgatcagaattctgcaaaaaga
caaagggtaaacgagccagagaatttaggtcctgttcctcagcggactgcacaacattgt
gcctcttgtgttccagaaaatggtttaaaggaagatgaagagtgtcaagcactgaaatta
ggttgtcagactttaaaagccaagtatttatctggattctattcaaagctttctgcagca
cagcaggaaggtctgggaaaaacggttgagctgcttgcttgcatcttctctaatcggaaa
ccagccaaagatggaatatctgaatctaatatatcatcagttcctgatgagcagaaaatt
agcctgaaaagattgaaaagggaacgtgttgagtgcatatgtggagctgtgagtgaaagt
cgcaaatacaagggaatgtgggtgcaatgtgacatatgtgatgcttggcagcatgcagac
tgtgtaggttattcccccaaagggaaagttaagaagcataaccaagatatagatggaaaa
gtatcaccaaagagaaggaaagagggtccaatgaaaattgaaatttgtgatgcattgagc
gatatgggaaaacaacattcaaattggtggctggacgcccttcaacttgctgggcaaaac
aaggatttcgccgctgagttgaccagaaagattgaagaggccatccatgggaacctaaat
aattcaagctcctccagaacaacttctcacttcagaactatacatggcatgaagtttcat
ctccagacttttatggatacgttggaaggctccagaaaaagggtgattgataggcttcta
gaaattgaccagacaatggagaaaccaaatattgaggatattgagcggattacgaattgc
aaatattgccagaagaaggatgatggccccttatgtcttcactgtgaactagacgagcta
ttccaggaatatgaggcgagactgttccgtcttaacagatctcgtagaggagtaatggaa
tctgcatctgtggaagagatggtagatatgcagaagaagaaatctgcccttaatcttttc
ttctcgggtttatcatcgagaaacaaggacttgaattcatcaaatgatggagacactgag
ccgacaaagagaaactctggtgatatcgtaattgtttcaaaatctccatccgagatggaa
atagctcttggagttatacgaacccattgtaaaacctacttagacagggaaggcaagttg
acagccacaaaacacatgcaaatgcttgagtggatgcgcaaggaatatgcacatgcaagg
gccttgtctagggcacaagctcagctcctgcgtgcctatgatgaaatcaagatggcaacc
atgagattacagctaagagaatttgaagatgacactcagatttatgctttgagccttgat
gagttagatgcagctagcgtgcagaacacaaacgataaatttctggctctatcatcgttg
cttagtacaaaaggaaagtttcgttacttgaaggagttgatgaaatccaaacagaaacaa
gaatctgagattccagatcaacaatcctcactgacaccggaagttaaggttccatcttcc
attgaacagaaaagcgaagggctactgaaacctgaggaagcatgccccatttgccatgaa
aatttatggaatcagaagatggttttccagtgtgggcacaccacttgctgtaaatgcttc
tttgctatgactgagagcagatcaggtcatgatactcagcagaaatgggtgatgtgtcca
atatgtcgacagcatacagatgtgggaaatattgcttatgctgatgatagacggaacaac
ggattcaattcttccacagatgaagattacaaagaagacgaagcatccttcgtagttcaa
ggttcatacggtacaaaggttgaagctgttactagaagaatcttgtggatcaagtctacc
gacccagaagcaaaggttcttgttttctccagctggaacgatgttctcgacgtgttagag
catgcctttaccgggaacgggatcaccttcatccgaatgaaaggaggcagaaaatcacag
acagccattagcaaattcagaggagaaactcagaaccagaagagaaacccccataagaaa
gagccaagatcgatccaagttctgttgctattgatacagcatggagccaatggccttaat
ctactagaggcacagcatgtaattatggtggaaccacttctaaacccggcggcagaagca
caagccgtcagccgtgttcatcggattggacaagacaagcctactcttgttcaccgtttc
cttgtaaagggcacggtggaggagagcatatacaagctgaacacgagtagaaacgtgaat
tcctcctccaactcgttcatcagcgggaacacgaagaatcaagatcaaccattcttgacg
ctcagagatctcgagtcattgttctcttcaacctcagcaccagacacaggagataattgg
gaccagacgaatctgagagatctgccaccttccgttgcagctgccatggcagccgaaagg
aggctcacggaaaatgctgcagcctcgtcatcaactttgtcttga
DBGET
integrated database retrieval system
