Tarenaya hassleriana (spider flower): 104824426
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Entry
104824426 CDS
T04125
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein PRP4-like protein
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
thj
Tarenaya hassleriana (spider flower)
Pathway
thj03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
thj00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104824426
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
thj03041
]
104824426
Spliceosome [BR:
thj03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
104824426
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40_Prp19
WD40
Beta-prop_WDR3_1st
Beta-prop_THOC3
Beta-prop_WDR3_2nd
WD40_Gbeta
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR36-Utp21_2nd
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_WDR36-Utp21_1st
NBCH_WD40
Beta-prop_IFT122_1st
ANAPC4_WD40
Beta-prop_WDR75_1st
Beta-prop_Aladin
Beta-prop_EIPR1
PRP4
WDR90_beta-prop_4th
Beta-prop_WDR41
Beta-prop_DCAF4
Beta-prop_WDR19_1st
Beta-prop_RIG_2nd
WD40_RFWD3
WD_LRWD1
Beta-prop_Vps41
Beta-prop_SCAP
eIF2A
PROPPIN
Beta-prop_SPT8
Tricorn_2nd
PEP5_VPS11_N
WD40_like
Motif
Other DBs
NCBI-GeneID:
104824426
NCBI-ProteinID:
XP_010554801
LinkDB
All DBs
Position
Unknown
AA seq
542 aa
AA seq
DB search
MEAEKEENVSSTSGSVPSASVPGLSSIPAVAAPSFPPPIAPIPMVPHPPVVRPPTFRPPA
PPQNGEAEASDSDTESEDGHYISEESRQVRERQEKAMQELLIKRRAAALAVPTNDKAVRE
RLRRLGEPMTLFGEQEMERRARLAQLMARLDIEGQLDKLLKAHEEETAPREEVEDEIPEY
PFYTEGPRELKEARMDIAMFSMNRAAVRLQRAKRRRDDPDEDMDVEIKWALKQAEGMVLD
CSNFGDDRPLSGCSFSRDGKILATCSLSGVAKLWEMPQVTNKVAVMKDHKERATDVVFSP
VDDCLATASADRTAKLWKTDGTLLQSFDGHLDRLARIAFHPSGKYLGTTSFDKTWRLWDI
NTGKELLLQEGHSRSVYGIAFHHDGSLAASSGLDSLVRVWDLRTGRSILAFEGHIKPVLG
VSFSPNGYHLASGGEDNLCRIWDLRMRKSLYTIPAHSNLISQVKFEPQEGYFLVTASYDM
KVKIWSGRDFQHVKTLSGHEAKVTCLDITADGSHIATVSHDRTIKLWASGGSEEEEGRMD
VD
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atggaggctgaaaaagaagaaaatgtttcatcgacttctggctctgtcccttcagcttca
gttccaggcctctcttccataccggctgtggccgcaccttcttttcccccgccaattgct
ccaattccaatggttcctcatcctccagttgtccgcccacctacatttcggccacctgcc
ccaccacagaatggtgaagctgaagccagtgactcagataccgaatcagaagatggacat
tatatctctgaagaaagcagacaagtgagagagagacaggaaaaggcaatgcaagagctg
ctgataaagcgtcgggctgctgctctagcagttcccacgaatgacaaagccgttagagag
cgtctgagacggctcggtgaacccatgactctctttggagaacaagaaatggagagaaga
gccagattggcacagcttatggctaggcttgatattgaagggcaattggataaactattg
aaagctcatgaagaagagacagctcctagagaggaagtggaggatgaaatacctgaatac
ccgttttataccgagggtccacgggagcttaaagaggctagaatggatattgccatgttt
tctatgaacagggctgctgtcaggcttcagcgtgcaaagaggagaagggatgatccggat
gaagatatggatgtagagataaaatgggctttgaagcaagctgaaggcatggtccttgat
tgcagcaactttggggatgatcgtcctctttctggctgctccttctcgagagatggaaaa
atacttgccacatgttctttgagtggagttgctaaattgtgggagatgcctcaagtcacg
aacaaggttgctgttatgaaggaccacaaagagcgtgcaacagatgtcgtgttctcccct
gtggacgattgtctggcaactgcttctgctgaccgaactgcaaagttgtggaaaaccgac
ggaacacttctccaaagcttcgatggtcatttggatcgtcttgctcgtattgccttccac
ccatcagggaagtaccttggaacaacaagctttgacaaaacatggagattatgggatata
aacacaggaaaagagctgcttctgcaagaaggacacagccggagcgtgtacggaattgca
tttcaccatgatgggtcattagctgcttcttctgggcttgattcacttgtacgggtttgg
gatctccgtactggaaggagcattcttgcgtttgaaggtcatatcaaaccggttcttggg
gtgagcttttcaccaaatgggtatcacttagcatctggtggtgaggataatctttgtcgg
atttgggatctaagaatgagaaagtcattatacactataccagctcactcaaaccttata
tctcaagtgaagtttgaacctcaagaaggatacttcctggtcaccgcctcttacgacatg
aaagtaaagatatggtcgggtcgagatttccagcatgtgaaaacattatcagggcatgaa
gcaaaagtaacttgtctggatattacagcagatggtagtcatattgcaactgtgtctcat
gatcgcaccatcaagctctgggccagcggcggcagcgaagaagaagaaggaagaatggac
gtggattag
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