KEGG   Tarenaya hassleriana (spider flower): 104824562
Entry
104824562         CDS       T04125                                 
Name
(RefSeq) replication factor C subunit 3
  KO
K10756  replication factor C subunit 3/5
Organism
thj  Tarenaya hassleriana (spider flower)
Pathway
thj03030  DNA replication
thj03410  Base excision repair
thj03420  Nucleotide excision repair
thj03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:thj00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    104824562
   03410 Base excision repair
    104824562
   03420 Nucleotide excision repair
    104824562
   03430 Mismatch repair
    104824562
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:thj03032]
    104824562
   03036 Chromosome and associated proteins [BR:thj03036]
    104824562
   03400 DNA repair and recombination proteins [BR:thj03400]
    104824562
DNA replication proteins [BR:thj03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    104824562
  DNA Replication Termination Factors
   ELG1-RFC complex
    104824562
Chromosome and associated proteins [BR:thj03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    104824562
DNA repair and recombination proteins [BR:thj03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     104824562
  Check point factors
   HRAD17(Rad24)-RFC complex
    104824562
SSDB
Motif
Pfam: RFC_C RCF1-5-like_lid DNA_pol3_delta2 AAA Sigma54_activ_2 Rad17 RuvB_N AAA_24 AAA_22 DUF815 AAA_5 AAA_29 AAA_2 POC1
Other DBs
NCBI-GeneID: 104824562
NCBI-ProteinID: XP_010554961
LinkDB
Position
Unknown
AA seq 342 aa
MLWVDKYRPKTLDQVIVHEDIAQNLKKLVMEQDCPHLLFYGPSGSGKKTLSSFVKVENRA
WKIDAGSRTIELELTTLSSTNHVELTPSDVGFQDRYIVQEIIKEMAKNRPIDTKGKKGYK
VLVLNEVDKLSREAQHSLRRTMEKYSSSCRLILCCNSSSKVTEAIRSRCLNVRINAPSQE
QIVKVLEFIAKKEGLQMPQGFAARIAEKSNRSLRRAILAFETCRVQKYPFTGNQEIPPMD
WEEYVAEIATDMMKEQSPKRLFQVRGKVYELLVNCIPPDVILKRLLHELLKKLDSELKLE
VCHWAAYYEHRMRLGQKAIFHIEAFVAKFMSIYKNFLISTFG
NT seq 1029 nt   +upstreamnt  +downstreamnt
atgctgtgggtagacaagtacagacccaaaaccctagatcaggtcattgtccatgaggac
attgcccagaacctcaagaagctggttatggagcaagattgtccgcatttgctcttctac
ggaccgtctggttcgggtaagaaaaccctttcttcttttgtgaaagtggagaacagggca
tggaagattgatgcagggagtagaaccattgagctggagctcactacattatcaagcacc
aaccatgtggaactcactcctagtgatgtaggctttcaggacagatatatcgttcaagag
ataattaaggaaatggcaaagaataggccaattgacactaaagggaaaaagggatataaa
gtgttagtactaaatgaggttgacaagctctcaagagaagcgcaacattctctgcggagg
acaatggagaaatatagctcctcttgtcgtctcattttatgctgcaacagctcgtccaag
gtgacagaagccattcgatcgagatgtctgaatgttcggattaatgcaccttctcaagaa
cagatagttaaggtgttggagttcattgcaaagaaagaaggcctgcaaatgccccagggc
tttgctgctcgtattgccgaaaagtcaaaccgcagtcttaggagagctattttggcattt
gagacttgtcgtgttcaaaagtatccattcacgggtaaccaagagatacctcccatggat
tgggaagaatatgttgctgaaatagcaaccgacatgatgaaggagcagagccctaaaagg
ttgtttcaggtgcgaggaaaggtgtatgaattgctagttaactgtataccaccggatgtc
atattgaagagactccttcacgaattgctgaagaaactggactcggagttgaagcttgaa
gtttgccactgggctgcatattatgagcataggatgcggcttggtcagaaagccatattt
cacatagaagcatttgtggccaagttcatgagcatctacaagaatttcctcatttcaaca
tttgggtga

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