Tarenaya hassleriana (spider flower): 104824696
Help
Entry
104824696 CDS
T04125
Name
(RefSeq) transmembrane E3 ubiquitin-protein ligase 1-like isoform X1
KO
K23788
transmembrane E3 ubiquitin-protein ligase [EC:
2.3.2.27
]
Organism
thj
Tarenaya hassleriana (spider flower)
Brite
KEGG Orthology (KO) [BR:
thj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
thj04121
]
104824696
Enzymes [BR:
thj01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104824696
Ubiquitin system [BR:
thj04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
104824696
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-RING_11
zf-RING_5
zf-C3HC4_2
zf-ANAPC11
DUF2921
zf-C3HC4
zf-C3HC4_3
zf_RING_Vps8
zf_RING_Vps8_fungal
zf-RING_16
PHD_NSD
Motif
Other DBs
NCBI-GeneID:
104824696
NCBI-ProteinID:
XP_010555111
LinkDB
All DBs
Position
Unknown
AA seq
645 aa
AA seq
DB search
MYRHICNDIIVVWYMSNLQVATNNFLNFVGLSPSLQLTLSLRLTSFEAISCNVLTGRFLR
DPGFVMRIDSDPVRKMGTWSCDQRKLEILGVGGLGFVRGVIVGLSIWFAVLQPASGLRPI
RESAEWLFGREEESEVGPFPAWNITGTYRGTWNFLDSANSSSRFPDFRKANGNSVIELVT
TPTKITAVHYVQGRVVFRDVFGNERNLGGGTQIKVEGVYIWPFRQLRLVANSGKGTDLGQ
EDDHLLWNTYHLLGIFSSQVFQESPRDRIMRKKISSIFEMEKHCNIEIAAQISHVASNEN
DGEQDSYHIEGLMESPAVDDDGDCFSPLLLNATSVNIEVYYNKAVNYTLMVTFISFLQVL
LLIRQMEYSNTQSGAAKISIVMIGQQSIMDSYLCLLHLTAGVLVESLFNAFATAAFFKFV
VFSFFEMRYLLAIWKASRPSNSGDGWETMRRELPFLYSRFYGILLGGILIMYGLHNYMRS
ILLVMYSFWMPQIIANVIRDSRKPLHPYYILGMTVTRLAVPLYVFGCPSNFMRVEPSKVW
CVCLCVFIGFQASLLLLQHYFGSRCFIPHQMLPEKYIYYRRLFDHDVNRTTDCVICMTAI
DLMQHSGDCMVMVTPCEHFFHSGCLQRWMDIKMDCPTCRRQLPPC
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atgtacaggcacatctgcaatgatataattgtcgtctggtatatgtccaatcttcaagtg
gctacaaacaatttccttaattttgttgggctctcgccttctcttcagctaaccctttca
ctccgtttgacttcatttgaagcaatctcctgtaatgtcctaacgggtcgttttcttcgg
gatcctgggtttgttatgcgaatcgattctgaccccgtaagaaaaatgggtacctggtct
tgtgatcagagaaagctggaaattttgggggtcgggggattagggtttgtgaggggggtt
attgtcggtttatcaatttggtttgctgttttacagccggcatccgggctgagaccgata
agggagagtgccgagtggctttttggtagagaagaagagagtgaagtgggaccgtttcct
gcatggaatataacgggaacatatagagggacttggaattttctagattctgcaaatagc
tcttcaagatttccagacttcagaaaagcaaatggcaactctgtcattgagttagtcaca
actccaaccaagataactgctgtgcattatgtgcagggcagagttgttttccgtgatgtt
tttggcaatgaacgcaacttgggtggtggtacccaaataaaagtggaaggtgtatatata
tggccctttaggcaacttcgtctcgtggctaacagtggaaaggggactgatttggggcaa
gaagacgatcatctcctctggaacacctatcatttgcttggaattttctcctcacaagta
tttcaagaatctccaagagacagaataatgagaaagaaaatttcttcgatttttgagatg
gagaagcattgtaacatcgaaatagcagcccagatatcacatgtcgcttctaatgaaaat
gatggagaacaagatagttatcatattgaaggtttgatggaaagtcctgcggtagatgac
gacggagattgtttctcacccttgctgctaaatgcaacttcagtaaacattgaagtctac
tataacaaagctgtgaattatacgttgatggtcactttcatctcttttcttcaggttctt
ctattaatccgacaaatggaatacagtaacacgcaatctggtgctgccaagatatcaatt
gtaatgattgggcaacagtcgatcatggattcttatctctgtcttttacatctgacagcc
ggggtattagttgaatcactgtttaacgcatttgcaacagccgcattcttcaaattcgta
gtcttttcgttttttgagatgagatatcttctggccatatggaaagctagtcggccttca
aacagcggagatggctgggaaacaatgagacgtgagctaccatttctgtatagtcgtttc
tatgggattcttcttggaggcattctgataatgtacgggttacacaactacatgaggtca
attctcctcgtcatgtactccttctggatgccgcagataattgcaaatgtcatccgcgat
tcgaggaagcctctccacccatactacatcttgggcatgacggttacacggctagcagta
cctttatatgtttttggatgcccaagcaacttcatgcgtgtagagcccagcaaggtctgg
tgtgtatgcttatgcgtgttcattgggtttcaagcttctcttcttcttcttcagcattat
tttggatcgcgttgtttcattcctcatcagatgttacctgagaaatacatctactacaga
agattatttgatcatgatgtaaaccgtaccaccgactgcgtcatctgcatgacagccatt
gatctcatgcagcattccggcgactgcatggtaatggtgacaccgtgtgaacatttcttc
cactcgggatgtttacagagatggatggacataaaaatggattgcccgacatgtcggcgg
cagcttcccccttgttag
DBGET
integrated database retrieval system
