Tarenaya hassleriana (spider flower): 104824804
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Entry
104824804 CDS
T04125
Name
(RefSeq) coatomer subunit alpha-1-like
KO
K05236
coatomer subunit alpha
Organism
thj
Tarenaya hassleriana (spider flower)
Brite
KEGG Orthology (KO) [BR:
thj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
thj04131
]
104824804
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
thj04147
]
104824804
Membrane trafficking [BR:
thj04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
104824804
Exosome [BR:
thj04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
104824804
Exosomal proteins of bladder cancer cells
104824804
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
COPI_C
B-prop_COPA_B_2nd
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
Beta-prop_TEP1_2nd
TPR_COPA_B
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
Beta-prop_EIPR1
WD40_MABP1-WDR62_1st
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_DCAF4
Beta-prop_SCAP
WD40_RFWD3
Beta-prop_SPT8
NBCH_WD40
Beta-prop_IFT122_1st
Beta-prop_WDR19_1st
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
Aa-Ago_N
Motif
Other DBs
NCBI-GeneID:
104824804
NCBI-ProteinID:
XP_010555274
LinkDB
All DBs
Position
Unknown
AA seq
1217 aa
AA seq
DB search
MLTKFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHEGPVRGVHFH
KSQPLFVSGGDDYKIKVWNYKTHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIW
NWQSRTCISVLTGHNHYVMCASFHPKDDLVVSASLDQTVRVWDIGALRKKTVSPADDILR
LSQMNTDLFGGIDVIVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWE
VDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDATKRTGLQTFRREHDRFWILAVHP
EMNLLAAGHDNGMIVFKLERERPAFSVSGDFLFYAKDRFLRYYEFSTQRDSQVIPVRRPG
TPSLNQSPRTLSYSPTENAVLVCSDVDGGSYELYIVPKDSVGRSDFVQEAKRGPGGAAVF
IARNRFAVLEKSTNQVLVKNLKNEMVKKSSLPIPTDAIFYAGTGNLLCRSDDRVVIFDLQ
QRLVLGELQASFVRYVVWSNDMETVALLSKHTIIIASKKLVHHCTLHETIRVKSGAWDDN
GVFIYTTLNHIKYCLPNGDSGIIRTLDVPIYITKVSGNNIFCLDRDGKNRVIAIDATEYI
FKLSLLRKRYDHVMSMIRNSQLCGQAMIAYLQQKGFPEVALHFVKDERTRFNLALESGNI
SIAVEAAKEIDEKDHWYRLGVEALRQGNAKIVEFAYQRTKNFERLSFLYLITGNMEKLSK
MMKIAEVKNDVMGQFHDALYLGDVRERVKILEGAGHLPLAYITASVHGLHDIAERLAAEL
GDNIPSLPKGKTPSLLIPPLPVLGDGDWPLLRVMKGIFEGGLESGVRGAVDEEEDGEGDW
GEELDVDDVDGLQNGDVEAIMDDAEAEGENEEEGGWELEDLELPPELEIPKLSANARCAV
FVAPTPGMPVSQIWTQKSSLAAEHAAAGSFDTAMRLLNRQLGIKNFMPLKSMFLDLFSGS
HSYLRAFSSSPVVSLAIERGWNESASPNVRGPPALVYSFSQLEEKLKAGYKSTTAGKFTE
ALRVFLSILHTIPLVVVESRREVDEVKELIIIVKEYVLGLQMELKRREMRDDPIRQQELA
AYFTHCNLQTPHLRLALLSAMSVSYKAKNLATASTFARRLLETNPTVESQAKMARQVVQA
AERNMTDATQLNYDFRNPFVICGATYVPIYRGQKDVSCPYCTARFVPSQDGKLCTVCDLA
VVGADASGLVCSPSQVR
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgctgacgaagttcgagacaaagagcaacagagttaagggtctcagctttcacagcaaa
aggccatggattcttgcgagtttgcacagcggtgtgatccagctttgggattaccgtatg
gggactttgatcgataggtttgacgagcatgagggacctgttcgcggtgttcatttccac
aaatcacagcctttgttcgtttcaggaggggatgattacaaaattaaggtttggaattac
aaaactcacaggtgcctgttcacacttcttgggcatcttgattatatacgcacggtccag
tttcaccatgagtacccatggattgtgagtgctagtgatgatcagactatccgcatctgg
aactggcagtcgaggacttgtatttctgtcttgactggtcacaaccattatgttatgtgt
gcttctttccatcctaaagatgaccttgttgtatcagcgtccttagaccagacggtccgt
gtttgggatatcggggctcttaggaagaagactgtatctcctgctgatgacatcctacga
ttgagtcagatgaatactgatctttttgggggcattgatgttatagtcaagtatgttctg
gaaggtcatgacagaggagtcaactgggctgcttttcaccccacccttcctctcattgtc
tctggtgcagatgaccgtcaagtgaagttgtggcgcatgaacgaaactaaggcctgggag
gtggacacactgcgaggtcatatgaataatgtgtcatgcgtcatgttccatgcaaaacaa
gacattattgtatctaactccgaggataaaagcattcgtgtctgggatgctaccaagcga
actggactccaaactttccgccgtgaacacgacaggttctggattcttgcggttcatcca
gagatgaatttattggccgcgggacatgacaacggtatgattgtctttaaacttgagagg
gaacgccctgcattttctgtgagtggtgattttttgttctatgccaaagatagatttctt
aggtactatgagttttcgacgcaaagagactcacaagtcatccctgtacgccgtcctggt
actccaagcctgaaccaaagtcctaggaccttatcttacagtccgacagaaaatgcagtt
cttgtatgctcagatgtggatggcggttcttatgagttgtacatcgtaccaaaagatagc
gtcggcaggagtgacttcgttcaggaggcaaaaagggggcccggaggtgctgctgtcttt
atagctcgaaaccggtttgctgttcttgagaaaagcacgaaccaagtgctggtcaagaat
ctcaagaacgagatggtaaagaagagttccctaccgatccccactgatgctatattttat
gctgggacaggaaatttgctttgcagatctgacgatagggttgttatatttgatcttcaa
caaagactggttctcggtgaacttcaggcctcatttgtcagatacgttgtttggtcaaat
gacatggagactgtcgctttactaagcaagcatactatcatcatcgccagcaagaagctt
gtccaccactgcacccttcatgaaacaatacgtgtgaagagtggagcttgggatgacaac
ggtgtctttatctacacaactttgaaccatatcaaatattgtctccctaatggagatagt
ggaataatccgaactctagatgttcctatctatatcacaaaggtttctgggaataacatc
ttctgcttggatcgggatgggaaaaacagggttattgccattgatgcaacagaatacatt
ttcaagctttccctgttgaggaagaggtatgatcatgtcatgagcatgattaggaattcc
caactttgtgggcaggctatgattgcttatctgcagcagaaaggattccctgaagttgcc
cttcactttgttaaagatgaaaggaccaggttcaacctggctttggaaagtggtaacatc
agtatagctgttgaagcagccaaagagatcgatgagaaagatcactggtatcgacttggg
gtggaggctctgcgccaaggtaatgctaaaattgtggagtttgcctaccagcggaccaag
aactttgagaggttatctttcctttatctcatcactggcaatatggaaaagctgtccaaa
atgatgaagattgctgaagtgaaaaatgacgtgatgggccaatttcacgatgccctctac
cttggagatgttagagagcgtgttaagatcctggagggtgctgggcatttgcctcttgct
tatatcacagcctctgttcatggtttgcatgacattgctgagcgtctggcagctgagttg
ggagacaacattccctctctgcccaaaggtaaaactccgtcacttctaattccacctctc
cctgtcttgggtgatggtgattggcctcttctgagagtcatgaaaggaatatttgaagga
gggctagaaagtggtgtcagaggggctgttgatgaagaagaagacggtgaaggagattgg
ggcgaggagcttgatgtggatgatgttgacggattacagaatggggatgtggaggcaatt
atggatgatgcagaagctgagggagagaacgaggaggaaggtggatgggaacttgaagac
cttgaactcccaccagagcttgaaataccgaagttatctgctaatgcacgttgtgcagtc
tttgtggcaccgactccaggcatgcccgtaagtcaaatatggacccagaaatcatctctt
gccgctgagcatgcggcagctgggagctttgataccgcaatgcggttgctgaacagacag
ctcggcataaagaattttatgcccttgaaatccatgtttctcgatcttttctcgggcagc
cacagctatctgcgtgccttttcttcgtctccagtggtttcccttgccatcgagcgtggg
tggaatgagtctgctagtcccaatgtccgtggcccaccagcccttgtttacagtttctct
cagcttgaagagaagctcaaggccggttacaaatctaccactgcaggaaagttcaccgag
gctcttcgtgttttcctatccatcctccacaccatcccactcgtagtagtcgaatcaagg
agagaagttgatgaggtcaaggaacttatcattatcgttaaggaatacgttcttggtctg
caaatggaactcaagaggagggagatgagagatgacccaatacggcaacaggagctggcg
gcctatttcacacactgcaacctacaaacccctcacctaaggctcgcccttctcagcgca
atgagtgtctcctacaaggccaagaacctggctacagcttcgactttcgcgaggaggtta
ctagagacaaacccgacagtggagagccaggccaagatggcgaggcaagtcgtgcaggcg
gcggaacgcaacatgacggatgcgacccagttgaactacgatttcagaaaccctttcgtg
atatgcggagccacatatgtgccgatctacaggggacagaaggacgtgtcgtgtccgtac
tgcacggctcggttcgtgccaagccaggacgggaagctctgtacagtgtgtgatcttgca
gtcgtcggggctgatgcttctggtttggtatgctccccttctcaagtccggtga
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integrated database retrieval system
