Tarenaya hassleriana (spider flower): 104825394
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Entry
104825394 CDS
T04125
Name
(RefSeq) uncharacterized protein LOC104825394
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
thj
Tarenaya hassleriana (spider flower)
Pathway
thj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
thj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104825394
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
thj03019
]
104825394
Messenger RNA biogenesis [BR:
thj03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
104825394
mRNA degradation factors
5'-3' decay
Decapping complex
104825394
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATHILA
Motif
Other DBs
NCBI-GeneID:
104825394
NCBI-ProteinID:
XP_019059501
LinkDB
All DBs
Position
Unknown
AA seq
759 aa
AA seq
DB search
MAFWIAGQQYRLTMAQFANILGVPYGATTALPSIHSDRLKALWRDIGSKRFKLSLLKSTW
IRHPTVRYFHMLLAHVVFGKTEPGGLNQTELLFIRYALSPSYGGDDWGMGQVDLASRVAL
HLHQIARSDLGVYVRCSGLVTMIARRVGVNVGRYERSRLKGATVLDLAALRSKLSLETLR
GNHLWLYYDQQGTSQRFTLPNSRNYAPDSFYNMSKLMRSLDMRAIKIDVCQNNCMMFWCG
DADILKRLYESHKTASQMRWHREHKCLSVFMHHGFAPYDQSGKQYSLWPIVLSSSTDGNA
FEKRVFILDDMRKWNWGGSRAKAAVLGYADEDAYHLFDKGEGAGLGSLSDMDDLATTFAK
LNRDVTGPKHPRVIGDRGSGSFSRESSSATDWTQDAELSSWLDQHMLDVQAQEAKRWSSQ
SQSSERSKPLCMTSSYPKQQPQLHHYNSEPIIVPESTFTSFPPPGLSALSAPNVSPLSSS
NLHLTGLSNVPHYGGNLARFASGGPTLSNMVQHHWFSDSGLLHGDHSGLLHSLVQQQKPH
LPPRNGLLSPHLISLPQRQSLAHLAAFQSQLYNSYPSPSRKAPFGAGEGREHKHRSSHRS
RKNRGISQQASDISSQKSEGGLQFSSKYMTSEEIESILKMQHSNSHSNDPYVNDYYHQAR
LAKKSVGSREKPHFYPSHLKEHQSRSRNSTEQHPQVHIDALGKITLPSVRRPLALVEVDS
PRGSSEGSSDHKDSEKHLDQEPLVAARVTIEDALGVLLS
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
atggcgttttggatagcaggccagcaataccgcctcacgatggcacagttcgccaacatc
ctgggcgtcccttacggagctacaacagccttgccctccatacactcagatcgacttaaa
gcattatggagagacatcgggtctaagcgcttcaagctcagcctcctcaaatccacttgg
atccgacatccgacggttagatacttccacatgctcctcgctcacgtcgtcttcggcaag
acagagcccggagggctgaaccagaccgagctgctcttcatcagatacgccttatcccct
agctatggtggggacgattggggcatgggacaggtcgacctagcatcgcgggtcgctcta
cacttgcatcagatagcccgctcagatttaggcgtctatgtccgatgcagcggcctcgtc
accatgattgcgagaagagtcggcgtgaacgtcggacgttatgagcgttctcgtctcaaa
ggcgccacggttctcgacttggctgctctgcgcagcaaactatcgttggagaccttgcgg
ggcaaccatctctggttgtactacgaccagcagggcaccagccagcgctttaccttgccg
aactctcgtaactatgctcctgattctttctacaatatgtctaaactcatgagatcatta
gacatgagggctatcaaaattgatgtgtgccagaacaactgcatgatgttttggtgtgga
gatgcagacatattgaagagattatacgaatctcacaagacagcatctcagatgcgttgg
cacagagaacataaatgtttatctgtgtttatgcaccatggatttgcaccgtatgatcaa
tctgggaaacaatattcgttgtggccaattgtgttatcgtcatctaccgacggaaatgcg
tttgaaaagagagtttttattcttgacgatatgaggaagtggaactgggggggctcgagg
gcgaaggctgctgttctgggatatgctgatgaggatgcgtatcacttgtttgataaagga
gagggtgctggtttaggatctttgtctgacatggacgatctcgcgacgactttcgcaaag
ttgaacagggatgttactggacccaaacatcctcgagttattggtgatagaggatcagga
tccttctcaagggaaagctcatctgctacagattggacgcaagatgcagagctttcaagc
tggttggatcagcatatgctagacgtacaagctcaggaagctaagagatggtcctcacag
tctcaatcatccgagcgttcgaaacctttgtgcatgacatcctcttatcctaagcagcaa
ccgcagctgcatcactacaacagcgaacccattattgtaccagaatcaactttcacatct
tttccacctcctggcttatcagccttatctgcaccaaatgtttctccactgtcaagttct
aatcttcatctaacgggattgtcaaatgtgccccactatggtggtaatttggcaagattt
gcatctggtggacccacacttagtaacatggtgcaacatcattggttcagtgactctggc
ctcctacacggggatcattctggactattacatagtctggtgcaacaacagaaaccccac
ttgcccccacgcaatggtcttctgtcaccacatttgatttcccttccgcagagacaatcc
ctagcccatcttgccgcctttcaatcccagctgtataattcatatccttctccgtcacgt
aaagcgccatttggggctggtgaaggtcgggagcataaacataggtcatctcacagaagc
cgaaagaacagaggcatctcccaacaggcgtcggatatatctagtcagaaaagtgagggt
ggattgcagtttagctcaaagtacatgacttcggaagaaatagagagtattctcaaaatg
cagcattccaattcacacagcaatgatccttatgtcaatgattattaccaccaagctcgg
cttgctaagaagtctgttggatcaagggaaaaacctcacttctatccttctcacctgaag
gagcaccaatctcggtcccgtaatagtactgagcagcacccacaagttcacatcgatgct
cttgggaagattacccttccttccgttcgtaggccgttggccctagttgaggtcgactct
cctcgtgggtctagtgagggaagctcagatcataaggactctgaaaagcatttggatcag
gaacctctggtcgctgctagggttactattgaagacgctcttggagttctcctgagttga
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