Tarenaya hassleriana (spider flower): 104825908
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Entry
104825908 CDS
T04125
Name
(RefSeq) endoribonuclease Dicer homolog 1 isoform X1
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
thj
Tarenaya hassleriana (spider flower)
Brite
KEGG Orthology (KO) [BR:
thj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
thj03036
]
104825908
Chromosome and associated proteins [BR:
thj03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
104825908
microRNA pathway
RISC loading complex
104825908
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonuclease_3
Ribonucleas_3_3
Dicer_dimer
dsrm
PAZ
Helicase_C
DND1_DSRM
DEAD
ResIII
Dicer_dsRBD
Dicer_PBD
SNF2-rel_dom
Piwi
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
104825908
NCBI-ProteinID:
XP_010556636
LinkDB
All DBs
Position
Unknown
AA seq
1946 aa
AA seq
DB search
MEDEARVSGGGGEIYWLDAREDISCDLIDDFVGFDRSVVQESIDNGVNNDFFGGIDHILD
SIKNGGGLPPVEKSNFSGSGVQDSRVPQNNFQISGNGYCGNDTGSGVPQWNGLGNNTEGE
TEKLGDREITVLAKENGLQKNSFRRNEASKERDFDKGERVGKRARVCSYKNERNNFMGRG
QLFSVDRDRSLNRKRPHVWDEGERGHGKRRDYYNNGSHRRDCRDREPRGYWVRDKLGENE
MVYRVGTWEANHDRDSKDENGKNQEGDGKVESKPDDLTEKVVEEQARRYQLDVLEQARTK
NTIAFLETGAGKTLIAVLLIKSVYKDLLGQNKKMLAVFLVPKVPLVYQQAEVIRKQTGYQ
VGHYCGDMGQDFWDARRWQREFETKQVLVMTAQILLNILRHSIIKMEMINLLILDECHHA
VKKHPYSLVMSEFYHTTTKDKRPSVFGMTASPVNLKGVSSQVDCAIKIRNLETKLDSIVC
TIKDRKELEKHVPMPSEIVVEYDKAATMWSLHEKIKQMITAVEEAAQASSRRSKWQFMGA
RDAGAKEELRQVYGVSERTESDGAANLVHKLRAINYALAELGQWCAYKVAQSFLTALQND
ERVNFQVDVKFQESFLSEVVSLLQCELSEGAASGKIVKVSELDNGNAQDRDNSDEIEEGE
LPDDHVVSGGEHVDVIIGAAVADGKVTPKVQSLIKILLKYQHTEDFRAIVFVERVVAALV
LPKVLAELPSLGFIRCASLIGHNNSQEMRTSQMQDTISKFRDGQVTLLVATSVAEEGLDI
RQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMVERGNLSHAAFLRNARNSEETLRKE
AIERTDLSHLKDTSRLISIDAVPGTVYKVETTGAMVSLNSAVGLIHFYCSQLPGDRYAIL
RPEFIMEKHEKPGGPTEYSCRLQLPCNAPFEILEGPICSSMRLAQQAVCLAACKKLHEMG
VFTDMLLPDKGSGQDAEKADQDDEGEPLPGTARHREFYPEGVADVLKGEWILSGMDGCDS
SKVFHLYMYAVKCVNSGSSKDPFLNQVSDFAVLFGNELDAEQVLSMSMDLFIARAMITKA
SLAYRGSLDVTANQLASLKNFHVRLMSIVLDVDVEPSTTPWDPAKAYLFVPVVDNISVEP
SKEINWDLVENITRTTAWNNPLQRARPDVYLGTNERTLGGDRREYGFGKLRHNIVFGQKY
HPTYGIRGAVAPFDVVKASGLVPVRDALGKENCDLPEGRLMMADGYTVAKNLIGKIVTAA
HSGKRFYVDSICYDMSAETSFPRKEGYLGPLEYSSYADYYKQKYGVDLKCRQQPLIKGRG
VSYCKNLLSPRFEQTGESEAILDKTYYVFLPPEICVVHPLPGSLVRGAQRLPSIMRRVES
MLLAVQLKDLINFPIPSSKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQ
KHEGQLTRMRQQMVSNMILYQYALEKGLQSYIQADRFAPSRWAAPGVPPVFDEDTKDDDS
SLFDEEKPVSEGNQVVTNHGFEDGEMEDGELESDLSSYRVLSSKTLADVVEALIGVYYVE
GGKHAANHLMKWIGIHVEADPTEIEGTVKAANVPESVLKSVDFIAIERALNYKFTEKGLL
VEALTHASRPSSGVSCYQRLEFVGDAVLDHLITRHLFFTYTSLPPGRLTDLRAAAVNNEN
FARVAVKHKLHLYLRHGSTALERQIRDFEKEVVNELMKPGFNSFGLGDCKAPKVLGDIVE
SIAGAIFLDSQKDTTVVWGVFEPLMQPMVTPETLPMHPVRELQERCQQQAEGLEYKASRS
GNMATVEVFIDGVQVGMAHNPQKKMAQKLAARNALAVLKEKETKQKEKEKEKEKEKKEPK
NGIVNQTFTRQTLNDICLRRNWPMPSYRCVKEGGPAHAKRFTFGVRVNTTDRGMTDECIG
EPMPSVKKAKDSAALLLLQLLNQLYS
NT seq
5841 nt
NT seq
+upstream
nt +downstream
nt
atggaggacgaagctagggtatctggaggagggggcgaaatatattggttagatgcccgt
gaggatatttcgtgcgatctaattgatgatttcgtgggttttgatcggtcggttgtccag
gaatccatagataatggggtgaataatgatttctttggcggtattgatcatattttagat
agtattaagaacggtggaggtctccctccagttgagaaatccaacttttctggaagcgga
gttcaggacagtcgcgttccacagaacaattttcagattagtggaaatggttattgcgga
aatgacactggaagtggtgttcctcagtggaatggacttggaaataacactgaaggagag
acagagaaattgggtgatagagaaattacagttttggctaaagagaatggtttacaaaag
aatagctttaggagaaacgaggcgtcaaaagagagagattttgataaaggcgagagggtt
gggaagagagctagagtttgtagttacaagaacgaaaggaacaactttatgggtagaggg
cagcttttttctgtagacagggatagatctttgaataggaaacggcctcatgtttgggat
gagggtgaaaggggtcatggtaagagaagagactactacaataatggcagtcacagaaga
gattgtagagatagagaacctagaggttactgggtgagggataaattgggtgagaatgag
atggtttatcgggtaggaacttgggaagctaatcacgatagagactcgaaggacgagaat
ggtaaaaaccaagaaggtgatggaaaggtagagagcaagcctgatgaccttacagaaaag
gtcgtggaagagcaagcacgtcgataccaattggatgtgcttgaacaggcaaggacgaaa
aacacaatagccttccttgaaacaggtgcagggaagactctcattgcagttcttctaatc
aaaagtgtttacaaggatttactgggtcagaataaaaaaatgcttgccgtgtttttggtt
cccaaagtgccattggtttaccagcaagcagaagtgatccgcaagcaaactggttatcaa
gttgggcattattgtggcgatatgggccaggatttttgggatgcccgaaggtggcagcgg
gagtttgaaactaagcaggtccttgtcatgacagcgcaaattctcttgaatatattgcgg
cacagcatcattaaaatggaaatgattaatcttcttattctcgatgaatgccaccatgcc
gtcaagaaacatccatactcattagtgatgtctgagttctatcataccaccacaaaggat
aaaagaccttctgtttttggaatgactgcctcgcctgttaacctaaagggtgtttctagt
caagtggattgtgcaataaaaattcgtaatctcgagaccaagctggattctattgtctgt
acaataaaagaccgaaaggaattagaaaaacatgtgcccatgccttcagaaatcgtcgtt
gagtatgacaaagctgctactatgtggtctcttcatgaaaaaataaagcaaatgatcaca
gctgttgaggaggctgcacaagcaagttctagaaggagtaagtggcaatttatgggggct
agggatgcaggagcgaaagaagagctgagacaggtttatggagtctctgagaggactgag
agcgacggggcggccaatttggttcataaactgagggccattaattatgctcttgctgaa
ctaggtcaatggtgtgcttacaaggtggcacaatccttcttgacggcactgcaaaacgac
gagagagtgaactttcaagtcgatgtaaagtttcaagagtccttcctcagtgaagttgtg
tcacttttacaatgtgagttgtcggaaggtgctgcgtctggcaagattgtgaaagtttca
gagctggacaatgggaatgcacaagatcgggacaattctgatgagattgaggagggagag
ctccctgatgatcatgtggtttctggaggggagcacgttgacgtaataataggggctgca
gtagccgatgggaaggttactccaaaagttcagtcgttgatcaaaatacttctcaagtat
caacacacggaggattttcgtgcaattgtttttgttgagcgtgtggttgctgctttagtt
cttccgaaggttttggctgagctgccttccttgggttttattcggtgtgctagtttgatt
gggcataacaacagccaggaaatgagaacatctcaaatgcaggatacaatttccaaattt
cgagatgggcaggtgacactattagtcgccacaagtgttgctgaggaaggacttgatatc
aggcaatgtaatgttgttattcgctttgatcttgctaagacggtgctggcatacatccag
tcacggggtcgggcaaggaagcctggatcagactacattctcatggttgagaggggaaat
ttatctcatgcagcattcttaaggaatgctaggaacagtgaggagaccttgcgaaaggaa
gctattgaaaggactgatcttagtcatctcaaggatacctcgaggttgatttccattgat
gctgtgcctggtacagtttataaggtggaaactactggtgccatggttagcttgaattct
gctgttggtctcatccacttctactgctctcagctacccggtgacaggtatgcaatactt
cgccccgagtttatcatggagaagcatgagaagcctggaggtcctaccgagtattcatgt
aggcttcagcttccatgcaatgcaccatttgaaatactcgagggtcccatttgcagttca
atgcgacttgcacaacaggctgtatgtctggccgcttgcaagaagctgcatgagatggga
gtgtttactgatatgctattgccagacaaggggagtggtcaagatgcggaaaaggctgac
caagatgatgaaggtgaacctcttcccggaactgctagacacagagaattttatcctgaa
ggtgtggctgatgtactgaagggagaatggattttatctggaatggatggctgtgacagc
tcaaaagtattccatctatatatgtatgctgtcaaatgtgtgaattctgggtcttctaaa
gacccattcctaaatcaagtttcagatttcgcggttctatttggcaatgagctggatgca
gagcaggtattatcgatgtcgatggatctttttatcgctcgggccatgatcactaaagca
tctcttgcttataggggctcacttgatgttacagcaaaccagctagcttcccttaaaaac
tttcatgtgagattgatgagtattgtgttagatgtggatgttgaaccctccacgacacca
tgggatcctgcaaaggcgtatttgtttgttcctgtggttgacaatatctctgtggaaccc
agtaaagaaatcaactgggatttggttgaaaacattaccagaaccactgcgtggaacaac
cccctccaaagagctcggccggatgtgtatcttggaacaaatgagagaactcttggtgga
gacagaagggaatatgggttcgggaaacttcgtcacaacattgtgtttggtcagaaatat
cacccgacttatggtattagaggagctgttgcaccttttgatgttgtgaaggcttctggg
ttggtacccgtaagagatgctctcggaaaggaaaattgtgatttacccgaaggtagactt
atgatggctgatgggtacacggttgcgaagaatcttatcgggaaaattgtgacagccgca
cattctgggaagcgattttacgtggattccatttgctatgatatgagtgcggaaacatct
ttcccaaggaaagagggctatctaggccctctggagtacagctcttatgctgactattac
aagcaaaagtatggagttgatttgaagtgtagacaacagcctttgatcaaaggaaggggt
gtttcatattgcaagaatcttctctctccacggtttgaacagacaggtgaatctgaggcg
atccttgacaagacatattatgtgtttcttccacctgaaatatgtgttgtacatccactt
cccgggtcacttgttcggggtgctcagaggctgccctcgataatgcgaagggttgagagt
atgttgcttgctgttcagctcaaggatttaatcaattttcccattccttcttcaaagatt
ctggaagctttgacagccgcctcatgtcaggagacattctgctatgagagagctgagctt
ctgggtgatgcgtatctgaaatgggttgttagtcggtttttgtttctaaaatatccacag
aaacacgagggtcaacttacaaggatgaggcaacaaatggttagtaacatgattctttac
caatacgcgctggagaaagggctacagtcatatatccaggcagaccggtttgccccgtca
aggtgggctgcacccggggttcccccggtttttgatgaggacacaaaggacgatgactcg
tcactttttgatgaagagaaacccgtttccgagggaaaccaagtagtaacaaatcatggt
tttgaagatggggagatggaagatggtgaactggagagcgacttgagttcatatagagtt
ctatctagcaagacattggccgacgtggttgaagctttgatcggtgtatattacgtcgag
ggtggtaaacatgcagctaatcacttgatgaaatggatcgggattcatgtggaggcagat
cctacggaaatagaaggaaccgtgaaggcagccaatgtaccagagagtgtactcaagagc
gttgattttattgcaatagagagggcgctgaactataagtttacagaaaagggtctgctg
gtggaagccctgactcatgcttcgaggccttcttccggcgtatcgtgttaccagagattg
gaatttgttggtgatgcggtcttggatcatcttataacaaggcacttgtttttcacctac
acaagtcttccacctggtcgcttgactgatctacgggctgcagctgtcaacaacgaaaac
tttgcacgcgttgccgttaaacataagcttcatctgtaccttcgccatggctctacggcc
ctcgagcgacagattcgggattttgagaaggaagttgtgaatgagttgatgaagccaggg
tttaactcctttgggttgggagactgcaaagctccgaaagttctaggggacattgttgaa
tccatagcaggtgccatttttctcgacagccagaaagatactactgttgtatggggggtg
tttgagccgttgatgcagccgatggtgacaccagagacactgccgatgcatccagtgagg
gagctgcaggagaggtgccagcagcaagcagaagggttggagtataaggccagtaggagt
gggaatatggccactgttgaagttttcatagatggagttcaggtgggaatggctcataac
cctcagaagaagatggctcagaagcttgctgccaggaacgcacttgctgtcttgaaggag
aaggagaccaagcagaaggagaaggagaaagagaaagagaaagagaagaaggaaccgaag
aatgggatagtgaaccagacgttcacgaggcaaacactgaacgatatatgcttgaggagg
aactggccaatgccatcgtacaggtgcgtgaaggagggagggcctgcccatgccaagcgc
ttcacgttcggggtcagagtcaatacgaccgaccgaggaatgaccgatgagtgcatcggt
gagccaatgcccagcgtcaagaaggccaaggactctgccgcccttctcctcctccagctc
cttaatcagttatattcttaa
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integrated database retrieval system
