Tarenaya hassleriana (spider flower): 104825910
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Entry
104825910 CDS
T04125
Name
(RefSeq) protein LHY-like isoform X1
KO
K12133
MYB-related transcription factor LHY
Organism
thj
Tarenaya hassleriana (spider flower)
Pathway
thj04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
thj00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
104825910
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
thj03000
]
104825910
Transcription factors [BR:
thj03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-factors
104825910
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_7
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
104825910
NCBI-ProteinID:
XP_010556640
LinkDB
All DBs
Position
Unknown
AA seq
727 aa
AA seq
DB search
METNTSGEELVTKTRKPYTITKQRERWTEEEHDRFLEALRLYGRAWQRIEEHIGTKTAVQ
IRSHAQKFFTKLEKEAQAKGIPVCQALDIEIPPPRPKRKPITPYPRKPGNGTSTSQVSSA
KDGKIALSASSSHCNQALDLEKEPLTEPDGVEKISNGKENQDDNCSGVSTRPPEAHCSSI
SSVNKYPLANKMAPKDPNTFRESEPSLRKAAADNGTSKTSNADNSCYSQDNAAKDLPHVN
LGREDNDVNGLPLADNMYDIQNYPWRFPVHVQNGGIGTCPQEFMFRPNGEFHGHSGLFTV
PATSASSQHQDNMHRSSHQAFSAFVPACHTQDDYRSFIQISSTLSNLIVSALLQNPAAHA
AATYAASFWPYANVGSSNDSSTSTIQTDGAFPLSQMSSPPNMAVIAAATVAAATAWWAAH
GLLPICAPFACSPMSATTDPPPSSAQTAMPETDKKEAATENTQEPAMEPSDALEVQNLAS
KSPASSSDDSEEIGRNKKEAGSKADDHKEEAVAAVQEQVVNSNTTQKKKMVDPSSCGSNT
PSGSDVETDALEKAEKDKEEDVKETEGNEPATESSNRRARSKDNSSDSWKEVSEEGRMAF
EALFARGRLPQSFSPPIDVEKLKESSEKEKINLDGKEREMWVQMDHKSKTQESICKGKDE
KSIAAAKDEKEVVIGNGKSIIKTRRTGFKPYKRCSMEAKESRVANISSSQAEENASKRLR
LEGEAST
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atggaaacaaatacctctggagaagaattggtaactaagacaagaaagccgtatacaata
acgaaacagcgggagagatggacagaggaggagcatgataggttcttggaagccttgagg
ctttatggaagggcttggcagcgaattgaagagcatatcggaacaaagactgccgtccag
atcagaagccatgcgcaaaagttctttacgaagctagagaaagaggctcaagccaaaggc
attcccgtttgtcaagctctggacatagagattccacctccacggcctaaaaggaaaccc
attactccttatcctcgaaaaccagggaatggtacatcgacatcacaggtttcatcagca
aaggatggaaaaattgccttatcagcctcttcttcacattgtaatcaggcactggatttg
gaaaaagagcccctcactgagcccgatggagttgagaaaatatcaaacggcaaagaaaat
caggatgataactgttcaggggtttccacccgcccccctgaagctcattgttcttccatc
tcctcagtaaacaaataccctttggcaaataaaatggctccgaaggatcctaacaccttc
agggagtctgaaccatcactgagaaaggcagctgcagataatggaactagtaagacttca
aatgcggataattcttgctactcacaagataatgctgctaaagacttgccccacgtgaac
ctaggcagagaggataatgatgttaatggattacccctcgctgacaatatgtatgacatt
cagaactacccttggcgttttccagtgcatgttcagaatggaggtattggaacgtgccct
caagagttcatgtttcgtcctaatggagaatttcatggacactctggcttgtttacagtt
ccagctacatctgcttcttcgcaacatcaagataacatgcatagatcttctcatcaagcg
ttttcagcttttgtacctgcatgccatacccaggatgattaccgttcatttatccagatc
tcatccacattgtccaatcttattgtgtcagctctccttcagaatcctgcagcccatgct
gcagcgacttacgctgcatcattttggccatatgcaaacgtcggaagttctaatgattca
tctacatctaccatccagacagatggagcatttcccctgagtcaaatgagctctcctcca
aacatggctgtgatcgctgctgctacagttgctgcagcaactgcttggtgggctgcccat
gggcttctgcccatatgtgctccatttgcgtgctcacccatgtctgctaccactgatcca
cctccatcttctgcccaaactgcaatgcccgagacagataagaaagaggcggctactgaa
aatactcaggaaccagcaatggaaccgagcgatgctctagaagttcagaatttggcatca
aagtcgccagcttcatcatctgatgactcggaagagattggaagaaacaagaaagaagca
gggtcaaaagctgatgatcataaggaggaggctgttgcagcggtacaggaacaagtggtt
aattcaaacacgacccagaaaaaaaagatggttgatccctcatcatgtggttcaaataca
ccttcaggaagtgatgtagaaacagatgccttggagaaagcagagaaagataaagaggag
gatgtgaaggagacagaagggaatgagccagctactgaatcaagtaaccgtcgagctaga
agcaaagacaactcaagtgattcctggaaggaggtgtctgaagagggtcgaatggcgttt
gaagctctatttgcaagggggagactgccacaaagcttttcacctcctatagacgtggaa
aagctaaaggaaagctcagagaaagaaaagataaatctggatggaaaagaaagagaaatg
tgggttcaaatggatcataagagcaagactcaagaatcaatttgcaagggcaaagacgaa
aagagcatagcagcagcaaaggatgagaaagaagtagtgattggaaatgggaaaagcatt
ataaagacaagaagaacagggttcaagccatacaaaagatgttcaatggaggcaaaggaa
agcagggttgcgaacattagcagcagccaggctgaggagaatgcctccaagaggttacgc
ttggaaggagaagcttccacttaa
DBGET
integrated database retrieval system