Tarenaya hassleriana (spider flower): 104826051
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Entry
104826051 CDS
T04125
Name
(RefSeq) pre-mRNA-processing factor 39-like
KO
K13217
pre-mRNA-processing factor 39
Organism
thj
Tarenaya hassleriana (spider flower)
Brite
KEGG Orthology (KO) [BR:
thj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
thj03041
]
104826051
Spliceosome [BR:
thj03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
104826051
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_PRP39_C
Suf
TPR_14
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
TPR_19
TPR_12
TPR_MalT
UTP6_C
TPR_2
TPR_10
DUF1024
Motif
Other DBs
NCBI-GeneID:
104826051
NCBI-ProteinID:
XP_010556865
LinkDB
All DBs
Position
Unknown
AA seq
781 aa
AA seq
DB search
MADSETMVAEASGVVNYSSGGYTSAPYEDYSASAPPAESAALENPTAANESDATNVDSSQ
SVNNESLVNGSVVEGGSNMPVENGNATDNMAATAPVAAHGDASGSALSPEEERLWNIARV
NSQEFNAWTALVDETEKVAQDNIMKIRKVYDAFLAEFPLCYGYWKRYADNEARVGAMDKV
VEVYERAVQGVTYSVDIWLHYCIFAINTYGDPDTIRRLFERGLTYVGTDYLSPPLWDKYI
EYEYMQQEWGRLAMIYTRILENPNQQLDRYFNSFKELAETRPLSELKSAEEAATGAATTP
SSAGDPAESAQSEAGGSADEGLLQADVSAEQSPKSASAGSSDVEELKKYITIREDMYKKA
KEFDSKIIGFEMAIRRPYFHVRPLNVAELENWHNYLDFIERDGDLNKVVKLYERCMIACA
NYPEFWIRYVLSMEANGSMDLAENALARATQIFVKRQPEIHLFAARFKEQNEDITGARAA
YQLVHSEISPGLLEAIIRHANMERRLGNLDDAFSLYEQAIAIEKGKEHSPILPILYAQYS
RFTYLVSGDAEKARKILVEALDHVQPSKTFLEALIHFETIQPPPRQIDYLQPLVEKFMMP
NADSQSSASLAEREELSSIYIEFLGLFGDAKSLKKFEDQHAKLFSPHRSTPELKKRSAED
LLSSDRNKMARTYGGTPPAQNQWAGSYIAQPQTWPSAQAPAPPQPWNPGYGQQAAYGGYP
AGYAAPQAPASVPQAAAYGTYPSASYPAQTYMPQSYAAAATVNAVPQPASTPQPYYSAPY
Y
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
atggcggacagcgagactatggttgcagaggcatctggtgttgtaaattatagttctggt
ggctatacctccgccccatatgaagattacagtgcttcagctcctccagcagaatctgca
gcgctcgaaaaccctactgctgcaaatgaaagtgatgctacaaatgttgattcatcccaa
tctgttaataacgaatctttggtcaatgggtctgttgttgaaggtggttccaatatgcca
gttgagaatggaaatgcaacagataatatggctgcaactgctccagtggctgcgcatgga
gatgcttctggatctgctctttctcctgaagaggagcgcttatggaatattgcaagggta
aattcccaagagtttaatgcttggactgctctggtcgatgaaacagagaaggtggcacag
gacaatataatgaaaatccgaaaagtctatgatgctttcctagctgaatttcctctatgt
tatggctactggaaaaggtatgctgataatgaggctcgagtgggagcaatggacaaagtt
gtggaggtttatgaaagggcagttcagggagtgacgtattcggttgacatttggttgcat
tattgcatttttgcaatcaatacttatggagacccagacactatcagaaggctttttgaa
cgaggattgacctatgttggaactgattatctttcccctcctttgtgggacaaatacatc
gagtatgagtacatgcaacaagagtggggcaggcttgctatgatatatactagaatattg
gagaatccgaatcaacagcttgatagatatttcaacagctttaaggaactagctgaaaca
cgacctctgtcagagttaaagagtgccgaggaagctgccaccggagctgctactaccccc
tcatctgctggtgatcctgctgaaagtgcacaatccgaggctggtggaagcgcagatgag
gggctgttgcaagctgatgtttccgctgaacaatctcctaaatcagcatctgctggctca
agtgatgttgaggaattgaagaagtatatcactataagagaagacatgtataagaaagct
aaagagttcgattctaaaatcattggcttcgaaatggccataagaaggccctatttccat
gtgcgtcctctcaatgtggctgaactggagaattggcataactatctggatttcatagaa
agagatggtgacttaaataaggtggtcaagttgtatgaaagatgtatgattgcctgtgca
aattaccctgaattttggattcggtatgttttaagtatggaggccaatggaagtatggat
cttgcagaaaatgctcttgctcgtgcaactcaaatctttgtcaagagacaaccggagatt
cacctttttgctgctcgatttaaagagcagaatgaagacattacaggtgctagagctgct
tatcaacttgtacactctgaaatttcacccggactccttgaagcaataattagacatgca
aacatggagcgtcgcctagggaatttggatgatgctttctctttgtatgaacaagcaatt
gctattgaaaaagggaaggaacactccccaatactacccattctgtatgctcagtattca
aggtttacctacttggtttctggagatgctgaaaaagccaggaagattctagtagaagca
cttgaccacgtacaaccatcaaaaacattcctggaggctctgattcattttgagacaatt
cagccgccaccaaggcagattgattatttacagccacttgtcgaaaagttcatgatgccg
aatgcagattcccagagtagtgcgagtcttgcggaaagggaagagttatcctctatctat
atagagttcttgggcttatttggagatgcaaagtccctaaagaagtttgaagatcaacat
gcaaaactcttttcaccccacaggagcacaccagagctgaaaaagcgcagtgcagaggat
cttctctcttctgatcgaaacaagatggcaagaacttatggtggaactccacctgctcag
aaccagtgggctggtagctacattgctcagcctcagacttggccatcagcccaagcccct
gcaccaccccagccatggaacccaggctatggccaacaggctgcatatggtggctatcca
gctggttatgctgctccacaggcaccagcctcagtgccacaggctgctgcttatggcaca
tatccttccgcgtcatatcctgctcagacatacatgccacaaagttacgcagctgcagca
acagtgaacgctgttccacaaccagcttccactcctcagccctactactctgctccttac
tactga
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