Tarenaya hassleriana (spider flower): 104826283
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Entry
104826283 CDS
T04125
Name
(RefSeq) protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 isoform X1
KO
K11661
helicase SRCAP/SWR1 [EC:5.6.2.-]
Organism
thj
Tarenaya hassleriana (spider flower)
Pathway
thj03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
thj00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
104826283
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
thj03036
]
104826283
Chromosome and associated proteins [BR:
thj03036
]
Eukaryotic type
Chromatin remodeling factors
SRCAP complex
104826283
SWR1 complex
104826283
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HSA
ResIII
DEAD
Myb_DNA-bind_6
Myb_DNA-binding
Motif
Other DBs
NCBI-GeneID:
104826283
NCBI-ProteinID:
XP_010557203
LinkDB
All DBs
Position
Unknown
AA seq
2053 aa
AA seq
DB search
MASKGGKSKPDNDSRAKRPKTLEAPKEPRRPKTHWDHVLEEMAWLSKDFESERKWKLAQA
KKVALRASKGTVDQATREEKKLKEEEQRLRKVALNISKDIKKFWMKIEKLVLYKHQLVLG
EKKKKALDKHLEFLLGQTERYSTMLAENLVEPYERGQNNAPEKQLAIESKSDEESLEQEP
IELNVAAGSESGTVENDVDYDISSGDDSEDNEDTIEEDEKHISERERQEELEALQNEVDL
PLEELLRSYSAARGPSICTLTCQKMAEIETDLASEGQYHGKEEKNNIAAAKETVGSTSVR
RSDHSNGELAMSETHSHELEPGPSEDVTTISWKSEKEGHPYDFNDEQEDVDFVVSTKEEK
DDEATLSEEEELAKADTKDPIDEIALLQKESEMPIEELLARYKKDIDGKEISEDEFGDAS
ALSVSEGLVESHEMKQQVDSDDDNVDSGACKPNLQPCFENHEDGTNEIKEENGVKIADAA
AAARSAQPTGFTFSTTKVRTKLPFLLKHSLREYQHIGLDWLVTMYEKRLNGILADEMGLG
KTIMTISLLAHLACDKGIWGPHLIVVPTSVMLNWETEFLKWCPAFKILTYFGSAKERKFK
RQGWMKPNSFHVCITTYRLVIQDSKIFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSK
RRILLTGTPLQNDLMELWSLMHFLMPHVFQSHQEFKDWFCNPIAGMVEGQEKVNKDVIDR
LHNVLRPFILRRLKRDVEKQLPVKHEHVILCRLSKRQRNLYEDFIASSGTQATLASGNFF
GMINIIMQLRKVCNHPDLFEGRPIVSSFDMVGIDVQLSSAICSMLSEGPFSRVDLEALGL
LFTHLDFSMTSWEGEETKAILTPPDLIKQRCDFDNGEAIYLGPINGKRLQGTNIFEEIQK
AILEERIKEAKDRAAAIAWWNSLRCQRKPTYSMSLRELLTIKGPLDDLNHCKASRSSYMY
SSKLADIVLSPVERFQKMIELVEAFTFAIPAARAPAPVCWCSKSETPVFLDLTYKEKATG
LLFPLLSPIRPAIVRRQVYFPDRRLIQFDCGKLQELAILLRKLKYEGHRALIFTQMTKML
DILEAFINLYGYTYMRLDGSTQPEERQTLMQRFNTNPKIFLFILSTRSGGVGINLVGADT
VIFYDSDWNPAMDQQAQDRCHRIGQTREVHIYRLISESTIEENILKKANQKRALDDLVIQ
GGGYNTEFFKKLDPMELFSGHKAHTSKDDKENNRNPGTEVALSNADVEAALKHAEDEADY
MALKRVEQEEAVDNQEFSEEPVDRPEDDELANEDDRKSEEPIDQGVVPAASIKDESFILN
YADTTEERAVVTFSSQEEDADMLDDVKHIAEAAAATGQAISSFENQLRPIDRYAVRFLEN
WDPIINEVAVETEAGFEEKEWELDHIERYKDEMEADIDDGEEPLVYEKWDADFATEAYRQ
QVEALAQHQLMEDLENEAREREAAEEADLHSTQNDFATKPKKTKRSKKAKFKSLKKGSLA
SESKPAKPVVKLEASTDDNNDDDDGAGYESSSDSDMISSHALMHRKCKKRELVVDTEDEK
TSKKKPKKPKKSLPDLSLSDAKYNQSSELYVDFMLSKQSDSMVVDNELKPASRNKIMGKV
SITSMPIKRVLLIKPEKLKKGNLWSRDCVPLPDFWLPQEDAILCAMVHEYGPNWSMISDN
LYGMAAGGAYRGRCRHPAYCCERYRELVQRHILSVSDKTMNEKNVNAGSGKALLKVTEEN
IQSLLNVAAEQPDTEMLLQKHFTCLLSAVWRMSSCSENHQNLSCNDLGFNEKLFGSVNHT
RDLVREPLQRMKITSLSSKLLESALQDASRTQPDNTVPPGLQEHQSINKEELDLTLEFQQ
HMDESLVPFPPIINLSIWGDSLKYTDDPPAEDHLKASQSVAENRYRSATNACVEDCFGWA
SSTFSANDPKSRMASKAQSLGKHKLGASDSVKSSKGKVRKLSAENSETNPFQEPRRPSKP
SQLTNDPSLKFDFTPVATEENLIVEVYECDSGILSEKGPHSEEIYGSEGRISHWYDPGFI
SGLDDFPSSLESD
NT seq
6162 nt
NT seq
+upstream
nt +downstream
nt
atggcttctaagggtggaaaatctaagcctgataatgattcaagagctaagcgcccaaag
acgctcgaagctcccaaagaaccacgtcgccccaaaacccattgggaccatgtgttggaa
gagatggcttggttgtcaaaggactttgaatctgaaaggaaatggaagttggcgcaggcg
aaaaaggttgctttgagggccagcaaaggaacggtagatcaagcaaccagggaagagaag
aagctaaaggaagaagaacaacgattgcggaaagtagcccttaatatttcgaaagatata
aaaaaattttggatgaaaatcgagaagctggttctttacaagcaccagctggtgcttggt
gagaaaaagaaaaaggcattggataagcatcttgaatttttgttaggccaaactgagagg
tactcaaccatgttagcagaaaatctagtggagccatatgaacgagggcaaaataatgct
ccagagaagcaactagctattgaatcaaaaagtgatgaggagagtttggaacaagaaccc
atcgagttgaatgtcgctgcaggttctgaatcaggaactgttgagaacgatgtagattat
gacatatcatctggggatgactctgaagataatgaagatacaattgaagaggatgagaaa
cacatcagtgaacgggaaagacaagaggaattggaagctttgcaaaatgaagtggatcta
cctcttgaagagttgcttagaagctattcagcagcccgaggtccctcaatctgcacacta
acctgccaaaaaatggctgaaattgaaactgatctggcctcggaaggtcaatatcatgga
aaggaggagaagaataatattgcagctgcaaaagaaactgtaggaagcacaagtgttcgc
cgttctgatcatagcaatggtgagttagcgatgtcagagacccattctcatgagcttgag
ccaggcccatctgaagatgtaacaactatctcttggaaatctgaaaaggaaggtcatcca
tatgacttcaatgatgaacaggaagatgtagactttgtagtttccactaaagaggaaaag
gatgatgaggcaacactatctgaagaagaggaactggcaaaagcagatactaaagatccc
atagatgagattgcattgctgcaaaaggagagtgaaatgcctattgaagaactgcttgca
aggtataagaaggacatcgatggcaaggaaatttcggaggatgagtttggagatgcatct
gctttatcagtatcggaaggccttgtagagtctcatgaaatgaagcagcaagtcgattca
gatgatgataatgttgattcaggagcatgtaagccaaatttgcagccatgcttcgaaaat
catgaagatgggaccaatgaaataaaagaagaaaatggtgttaaaattgctgatgctgca
gcagcggcaagatccgcgcagccaacaggttttaccttctcaacaacaaaagtccgtacg
aagctcccgtttctactcaagcattcactgcgtgaataccagcacattggcttggactgg
cttgtcaccatgtatgagaaaaggttaaatgggattttggctgatgaaatggggcttggg
aagacaatcatgaccatttctcttcttgcacaccttgcctgtgacaaagggatatggggt
ccccatctgatagtggttccaacaagtgtgatgctgaactgggaaactgagtttcttaaa
tggtgtcctgcatttaaaattctcacctactttgggagtgcgaaggagcggaaattcaag
agacaaggttggatgaagccaaattcatttcatgtatgcataacaacctataggttagtt
attcaagatagtaaaatcttcaagcgcaagaagtggaaatacttgattcttgatgaagcc
catttgattaagaattggaagtctcagagatggcaaactctattgaacttcaattccaaa
cgcagaattttgttgactggtacaccgctgcagaatgaccttatggaactctggtcgctt
atgcattttttgatgccacacgttttccaatctcaccaggaatttaaagattggttttgt
aatccgatagcggggatggtggagggacaagaaaaagtcaataaagatgttattgatcgc
ttgcataatgtccttcgtcctttcattttacggcgtctaaaaagggacgtggagaagcaa
cttcctgtgaaacatgagcatgttatactctgtagactgtctaagaggcaacggaacttg
tatgaagactttatagcaagctcaggaacacaggctacgcttgcaagcggcaacttcttt
gggatgattaatatcataatgcagctgcggaaagtttgtaatcatcctgatctttttgag
ggtcgtcctattgttagttcttttgatatggttggcattgatgtgcagttgagttcagca
atttgttctatgctctcagaaggtcccttttccagggtagatcttgaggctctgggactc
ctattcacgcatctagatttctctatgacttcctgggaaggggaggaaacgaaagctatt
ttgacacctccagatttaatcaagcaacgttgtgactttgacaatggggaggcaatctat
ctgggtccaataaatggtaaaaggcttcaaggaacaaatatttttgaagaaattcaaaaa
gcaatcttggaggagaggattaaagaagctaaagaccgagcagcagccattgcttggtgg
aattctttgagatgccaaagaaaacctacttactcaatgtctctaagggagcttttgacc
ataaaaggtccccttgatgatctaaatcactgcaaggctagtcgttcatcctacatgtat
tcctcaaagcttgctgatatagttctttcaccagtcgagcgttttcagaagatgatcgag
ttagttgaagctttcacttttgcgataccagctgcacgagcaccagcacctgtttgctgg
tgcagcaaaagtgagactcctgttttccttgatctaacatacaaggagaaagctacaggc
ttgttgtttcctcttctgtcacccattagacctgctattgtgagaaggcaagtatatttc
ccagataggcggttgatacagtttgattgtggtaagctgcaggagcttgctatcttgctg
agaaaacttaaatatgagggtcatcgagctctgatattcactcaaatgaccaagatgctt
gacatattagaggctttcattaatttgtatggttatacttacatgcgtttagacggctct
actcagccggaagagaggcagacactgatgcagcggtttaatacaaatcccaaaattttt
cttttcatcttatcaactcgaagtggtggtgttggtattaaccttgtgggtgcagacacg
gttatattttatgacagtgactggaatcctgctatggatcaacaagctcaagatcgctgc
cacagaataggtcagacacgtgaagtgcatatatatcggttgataagtgagagcactatt
gaagaaaatatcttgaagaaagcaaatcagaagcgtgcccttgatgaccttgtgattcag
ggtggtgggtacaacactgaatttttcaagaagctcgaccccatggagctgttctctgga
cataaggctcacaccagtaaggatgacaaggaaaacaaccgcaatcctggaactgaggtc
gctctgtcaaacgcagatgtggaggctgctttgaaacatgccgaagatgaagcagattac
atggctcttaaaagggtagaacaagaagaagcagtggataatcaagagttttcggaagaa
cctgttgatagacctgaagatgatgagctcgcaaatgaagatgatagaaagtctgaggag
cctattgatcaaggtgtcgtgccagcagcttcaattaaagacgaaagctttatcttaaat
tatgctgataccacagaagagagagctgtcgttactttttcaagccaagaagaagatgct
gatatgctggatgatgtcaaacacatagcggaggcagcagccgccactggacaagctatc
tcttcttttgagaatcagctccgtccaattgacagatatgcagtaagatttctggaaaat
tgggatcccataataaacgaggttgcagtggaaactgaggctggatttgaagagaaagaa
tgggaacttgatcacattgaaaggtacaaggatgaaatggaagctgatattgatgatggt
gaagagcctctagtgtatgagaagtgggatgctgattttgcaacggaggcatacaggcaa
caagttgaagccttagctcagcatcagttgatggaagatttggaaaatgaagctagagag
agggaagctgcagaagaggcagatttgcattctacacagaatgattttgcaacgaaacct
aagaagacgaaaaggtccaagaaagccaagttcaagtccctgaagaaaggatctctagct
tctgaatcgaaacctgcaaaaccggtagtgaaactcgaagcttccacagatgataataac
gatgacgatgatggtgctggctacgagagtagtagtgactcggacatgatatcatcacat
gcattgatgcacaggaaatgcaagaaaagagaattagttgttgacactgaggatgagaag
acctcaaagaagaaaccaaagaaacccaagaaatctcttcctgatctttctctttcagat
gcgaaatacaatcaatcaagtgaactgtatgttgactttatgctgtccaagcaatctgac
agcatggttgttgataatgagttgaaaccagcaagcaggaacaaaattatggggaaggtt
tccataacttccatgccaataaagcgtgttcttttgatcaagccagagaagttaaagaaa
gggaacctgtggtcaagagattgcgtccccttgcctgatttttggttgccgcaggaggat
gctatattatgtgcaatggtacatgaatatggccccaactggagtatgattagcgacaat
ctttatggcatggctgctggtggggcctacaggggacgatgtcgtcatccggcttattgt
tgcgagagatatagggaacttgttcaaagacatattttgtctgtttctgacaaaacgatg
aatgagaaaaatgtcaatgcaggttcagggaaggctctccttaaagtcactgaggaaaac
atccagtcactcctgaacgttgcagctgagcagcccgacacagagatgctccttcagaaa
cattttacttgcctgctatcagctgtttggaggatgtcgtcctgctctgagaatcatcaa
aacctctcctgcaatgatcttggcttcaatgaaaaactttttggttctgtgaatcacact
cgagatttagtcagagaacctcttcagaggatgaagatcaccagcttaagtagcaagttg
ttggagtctgccctccaggacgcaagcaggactcaaccagataacactgttcctcctgga
ttgcaggagcatcaatccatcaataaggaggagttagacttgaccttggaatttcagcag
cacatggatgaatccttggttccattcccaccgatcattaatttatctatctggggagat
tcattaaaatacacagatgaccctccggcagaagatcatttaaaagcttctcagagtgtt
gcagagaaccgttataggtctgctacaaatgcttgtgttgaagattgtttcggatgggct
tcaagcactttctcagcaaatgatccaaagtcgagaatggcctctaaggcacagtccttg
gggaaacacaagctcggagcttcagactcagtcaaatcttctaaaggaaaagtgcggaaa
ctatcagcagagaattcagagacaaacccatttcaggagccaagacgtccaagcaagcca
tcccagctgacaaacgacccaagtctgaaatttgatttcacacctgtggccacagaggaa
aatttgatagttgaagtttatgagtgtgattcaggaatattatcagagaagggaccccat
tcagaagaaatatatggttcagagggaaggatctcacattggtatgatcctgggtttata
tcaggacttgatgatttcccaagttctctggaaagcgactag
DBGET
integrated database retrieval system
