Tarenaya hassleriana (spider flower): 104826398
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Entry
104826398 CDS
T04125
Name
(RefSeq) syndetin-like isoform X1
KO
K23288
syndetin
Organism
thj
Tarenaya hassleriana (spider flower)
Brite
KEGG Orthology (KO) [BR:
thj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
thj04131
]
104826398
Membrane trafficking [BR:
thj04131
]
Protein recycling
Others
EARP complex
104826398
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
Motif
Other DBs
NCBI-GeneID:
104826398
NCBI-ProteinID:
XP_010557376
LinkDB
All DBs
Position
Unknown
AA seq
1116 aa
AA seq
DB search
MQPNLFPFGTVLGNPFLFNGGDLSEFGAEGFGSSRVFFLVPFLLSQGGGMDLSKVGEKIF
SSVKSARSLGLLPSASFSDRPEIPARAAAAAAVARALAGLHPDQSISSSSKELSSIYGRK
PPPQEVDEPEEGFYEEDFDPVRHVLENVPDDENDLAYFEKQAVLRLAQLDRVAENLSHHV
MEHHEVMVKGMNLVRELERDLKIANVICKNGRRHLTSSMNEVSRDLIVNTHSKRKQALLD
MLPILTELCHARDMQLTLDALVEEGNYCKAFQVLSEYLQLLDSLSEFSAIQQMTRGVEVW
LGRTLHKLDSLLLGVCQEFKEESYLMVLDAYALIGDVSGLAEKIQSFFMQEVISETHSVL
KANVLEENDVAMQNSRHTYSDLCLQIPEPKFRQCLLRTLAVLFQLICSYHEIMCFKPEKK
VENLIPTSSGATQQINVVAGSSYNPQDAFSSAPESGSGTVTVEEFSTMSLSDGTGTSSSM
QLESDSRISEARDSRDADSSSESPWYYLRKEGAAFVSETLQRGRRNLWQLTTSRVSVLLS
SPAASSTSIHQFLKNYEDLSVFILSGEAFCGVEAVDFREKLKGVCENYFIAFHRQSMHAL
KMVLDKETWTKLPPDTVQAINFAGLVGDGAPLIISSRGASASSRFLQSNKSNNSIVANAN
RDGFSYWLKSENPFLAKLTYYREEQDYLFSGAASGDHEGNDSIHEDSVSPNRRGVRRMNG
ASPVSEDENEDLLADFIDEDSQLPSRSFKHGRSRSLSSHLSTSDDFTAQTGSSLCLLRSM
DKYARLMQKLEIVNVEFFKGICQLFGVFFYFVFQIFGQENSSGKGFADSLNHRLKSSLFR
ISQDCEQWIKPQLSTSSSSSPGFPHAVHSLSDVTPANPLNMISGHLSGISFGLKERCASA
DTISLVGRILHKSKAHLQSMLMSRNGALVEDFFGQLVDSVPALTEHIHRTTARILLHVNG
GFCRYVDRIANSKWEVKELGMEHNGYVDLMLGEFKHYKTRLAHGGIHHEVQNLLLEYGVE
IVSETLVEGLSRVKRCTDEGRALMSLDLQVPFPHPYYFQDIINELSFPNRVWICHNHLPD
MPLVNYIPHLKPEIENCVYTLYVVWMIAVMVSNHPS
NT seq
3351 nt
NT seq
+upstream
nt +downstream
nt
atgcagcctaatctgttcccattcggcacagttttggggaatccatttctgttcaatggc
ggggatctgagcgagtttggcgctgaagggttcgggagctctagggttttcttcttagtt
cctttcttattgtcccaaggaggtgggatggatttgtctaaggtcggcgaaaagatcttc
agctccgttaagtccgcgagatcgctcgggcttttgccttctgcttctttctccgaccgt
cctgagattccagcccgtgctgctgctgcagctgctgttgctcgtgctttggcaggactg
catcctgatcagagtatatcttcaagttctaaagaactgagctcaatatatggacgcaaa
cctccccctcaagaagttgatgagcctgaagaaggattctatgaggaagactttgatcca
gtaaggcatgttttggagaatgtgccagatgatgagaatgatcttgcttattttgagaag
caggctgtcctgaggctggcacagctggatagagtagcggaaaatctgtcccatcatgtt
atggagcatcatgaagtaatggtgaaggggatgaatttggttagagaattggaaagagat
ttgaagattgcgaatgtcatctgcaagaatggaagaagacatttgacttcatcaatgaac
gaggtgtcaagagatctcattgtaaacactcattccaaaaggaaacaagcccttctggac
atgcttcctattttaacagagctttgtcatgcaagagacatgcaattaactcttgatgcc
ctcgttgaggaaggaaactattgcaaggcatttcaagttctatctgagtatttgcagctg
cttgatagtctttctgaattctcagcaatccaacaaatgactcgtggtgttgaggtttgg
ctagggagaactcttcataagctggattcactgttgttaggagtttgccaggagttcaaa
gaagaaagttatttaatggtactcgatgcttatgcattgattggtgatgtctctggtctt
gcggagaagatacaaagcttctttatgcaggaagttatttcagaaacccattctgtactg
aaggccaatgttttggaggaaaatgatgttgctatgcaaaatagtagacatacctacagc
gatctctgtcttcagatacctgaacccaagtttaggcaatgtcttttgagaacactagct
gttctatttcagttgatatgttcgtatcatgagataatgtgtttcaagccagaaaagaag
gtagaaaatttgatccctacaagttcaggtgcgacacaacagattaatgtagtggcaggc
agttcttacaaccctcaggatgcattctcttcagccccagaatcaggatctggtacagtt
actgtagaagaattctcaaccatgtccctgtccgatggaactggaacctccagttccatg
cagctagagtccgacagtagaataagtgaggctagggattctagagatgctgattcaagc
agtgagtcgccatggtattatcttcggaaagaaggtgcagcttttgtgtcagaaaccctc
cagagaggacgcagaaatctctggcaacttacaaccagtcgtgtgtctgttttgctttct
tctccagctgcttcttcaacaagtattcatcagttcttgaaaaattatgaagacctgagt
gtcttcatcctgtccggggaagcattctgtggagttgaagctgttgattttagggagaag
ttaaagggtgtatgcgaaaattatttcattgcatttcacaggcaaagcatgcacgcactt
aaaatggttttggataaggagacttggactaaacttccacctgatactgtgcaagctatt
aattttgctggtcttgtgggggatggggctcccctaattatttcttctcgcggagcctct
gcttcttccagatttcttcagtcaaataaatcaaataactcaattgtagcaaatgccaat
agggatggattctcttattggctgaaaagtgaaaacccttttttagcaaagttaacttac
tacagagaagaacaagactatttgtttagtggagctgcttctggagatcatgaaggaaat
gatagcattcatgaggatagtgtttctcctaataggagaggtgtaaggcgcatgaatgga
gctagtcctgtttctgaagatgaaaatgaggaccttcttgctgattttatcgatgaggat
agtcagcttcctagccgcagctttaaacatggccgctcaagaagtctttcttcccatctg
agtactagtgatgattttacagctcaaacaggatcatctctttgtcttctaaggtcaatg
gataaatatgcaaggcttatgcagaagctggaaatagttaatgttgaattctttaaggga
atatgccaattgtttggggtttttttctattttgtatttcaaatatttggtcaagaaaat
tccagtggaaaaggatttgctgactctctcaatcatcgtttgaagagcagcttgttccga
atatcacaagattgtgagcagtggataaaacctcaattgtcaacatcctcatcttcttca
cctggctttcctcatgcagtccatagtcttagtgatgtgacacctgcaaatcccctgaat
atgatttcaggtcacttatcaggcatatctttcggtctcaaggaaagatgtgcttctgca
gacactatatctcttgttgggcggatattgcacaaatcaaaggctcatctccaatcaatg
cttatgtcaagaaatggtgctctggtcgaagatttctttggtcaactggtcgattctgta
cctgctctgacagagcacatacataggacaactgcaaggatactgctccatgtgaatggt
gggttttgcagatatgttgatcgaattgctaattctaaatgggaagtgaaggagcttgga
atggaacataatgggtatgtcgatttgatgctcggagaattcaaacactacaaaacaagg
cttgctcatggaggtattcatcatgaggtccaaaatctcctgctggagtatggggtggaa
atagtttcagaaacgctggtcgaaggtttatcacgagtgaagagatgtactgatgaaggc
cgtgctctcatgtcattggatctccaggtacctttcccccatccttattatttccaagat
atcataaatgagctgagtttcccgaatcgtgtatggatctgccacaaccatctgcctgat
atgcccttggtgaattacattcctcatttaaaacccgaaatcgaaaactgtgtttacact
ttgtatgtagtgtggatgatagccgtgatggtgagtaaccatccgtcttga
DBGET
integrated database retrieval system
