Tarenaya hassleriana (spider flower): 104826497
Help
Entry
104826497 CDS
T04125
Name
(RefSeq) pre-mRNA-processing protein 40B isoform X1
KO
K12821
pre-mRNA-processing factor 40
Organism
thj
Tarenaya hassleriana (spider flower)
Pathway
thj03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
thj00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104826497
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
thj03041
]
104826497
Spliceosome [BR:
thj03041
]
Complex A
U1 snRNP components
U1 related factors
104826497
Complex B
104826497
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FF
WW
FF_RHG35_4th
WW_TCERG1
WW_2
GCK
FYRC
Motif
Other DBs
NCBI-GeneID:
104826497
NCBI-ProteinID:
XP_010557525
LinkDB
All DBs
Position
Unknown
AA seq
985 aa
AA seq
DB search
MSNNPQYPGFQPLRPPSGGLIRATQEFAPSMDFQFRPTFLVPQSEQFVAMNSQNFQSVDR
GGTSMICGFSSQSLPPQSIAPMPQLFERSSQSGNVQQVARGPPALIAHSSGPMASRISFR
HPGVQTPANFTPAFGGHGTISSSISFASSYARSEGAFLIQNTAAASTMYPTFEQPSAACV
QPKPSEEALTDWVEHTSTDGRRYFFNKRTKQSTWEKPFELMTQLERADASTNWKEHTSPD
GRKYYYNKVTKQSTWSIPEELKIAREQLEKASVQGPQLEASVNVSKMPSTSIMAFSAASV
LSSQVSLMPSTSISNEKPVASSELAASACGSSSLIENADEIQLNADSSTSQLLDNTATAG
ASAAETKSIAEIVDKDKISTENFRASDGPSADDVKQDCRSEPKGSEKNTMDGENIDSQFE
GERIQKELVSYANKLEVTDAFKSLLESANVGSDWTWEQAMRVIITDKRYGALRTLGERKQ
AFNEFLIQKKIEEAEERRVKQNKKCEEFKKMLEECMELTPSTRWSKAVNMFEGDERFKAL
DREKDRRDIFEDHIDEMKEKERVKALEERKRNIIEYRNFLEYCDFIKPNSQWRKVQDRLE
ADERCLHLEKIDRIEIFQEYLRDLEREEEERKKILKEELKKAERKNRDEFRKLIDEHIST
GVLTAKISWRDYLTKVRDSPVYSAIVSNSSGATPKDLFEDAVDDLQKQHRELKSRIKHCL
KRGKITLSSASTFDEFKVSVSEEISFPVSDVNLKLVFDDLLERVKEKEGKEAKKCKRLAE
DLVDILRSFKDITASSSWEDCKHLVEGSQECRSVGDEDFRRQTFEDYVSHLKERATEIKR
REEEKVKEAVREDKKKAKHRRDDSKDGHEEASVDDYDNHDLVEGHGKEGRRSARGSGNRH
RDRHGNFKENETSRKNGTHKNGGSHDKSRQRRQTSTPEAEGESREKRRRKDEENGEKRRK
KDDDKNGMEGNCEEEELEDGECGRY
NT seq
2958 nt
NT seq
+upstream
nt +downstream
nt
atgtccaataaccctcaatatccgggctttcagcctctccgtcctccgagtggtggcctc
atacgtgctactcaagaatttgctccatcgatggactttcagttccgtcctacctttcta
gttccacaatcagagcagtttgtggcaatgaattctcagaattttcagtctgttgataga
ggtggtacatcgatgatttgtggcttttcatctcaatctcttccacctcagtctatagca
ccaatgccccaattatttgaaagatccagccaatcaggtaatgtgcaacaagtggcacga
ggaccacctgcactaattgcacactcgagtgggccaatggcttctaggatctcctttcgt
catcctggtgtgcaaactccagccaactttacgcctgcctttgggggccatggaacaata
tcttcctctatttcatttgcctcatcttatgctcgttcagagggggcatttctcatccaa
aatacggcggctgcttctaccatgtatcccacatttgaacagccttcggctgcttgtgta
caaccgaagccatccgaagaagctctaacagattgggtggagcatacttccacggatgga
aggaggtactttttcaacaaaaggacaaagcagtctacttgggagaagccttttgagttg
atgacacaacttgagagagcagatgcatcaactaactggaaagaacatacaagtcccgat
ggtagaaagtattactataacaaggttaccaagcagtcaacgtggtcaatacctgaggaa
ttaaagatcgctcgtgaacaattagaaaaggcatctgttcaaggaccacagctggaagct
agcgtgaatgtttctaagatgccatctacttccattatggcatttagtgccgcatctgtt
ctttcaagccaagtttcgcttatgccatcaacttctatttccaatgagaaacctgtggcc
tcttctgagctggcagcttcagcttgtggaagttcttctctgatagaaaatgcagatgaa
attcagttgaacgcagatagcagcacgtcacaactgcttgataacacagcaactgctggt
gcttctgccgccgagacaaaatctattgcagaaattgttgacaaggataagatctctact
gagaattttagagcttcagatgggccatcagcagatgatgtgaagcaagactgtaggtct
gagcccaaaggaagcgagaaaaatacaatggacggtgaaaatattgatagtcaatttgaa
ggggagcgaatccagaaagagcttgtttcttatgccaacaaattggaagttactgatgcc
tttaaatcacttttggaatctgcaaatgttggatctgactggacatgggaacaggcaatg
agagtaataattactgacaaaagatatggtgctttgaggactcttggagaacgaaagcag
gctttcaatgagttcttaattcaaaagaaaatagaggaagctgaagaacggcgggtcaaa
cagaataaaaaatgcgaagaattcaaaaagatgttagaagaatgcatggagctcactccg
tctactcgatggagcaaagctgtaaatatgtttgaaggcgatgagcgtttcaaagcactt
gacagagaaaaggatcggcgcgatatttttgaagatcatatcgatgagatgaaggaaaag
gagcgcgtaaaagcacttgaggagcgcaagcggaacataattgaataccggaactttttg
gaatattgcgatttcattaagccaaatagtcagtggcgcaaagttcaggaccgcttagaa
gcagatgaaagatgtctgcatctcgaaaaaattgatcggatagaaatctttcaggaatat
ttacgtgatttggagcgagaagaagaggagagaaagaagatactgaaggaggagctgaaa
aaggcagagaggaagaatcgggatgagttccgtaagttgatagatgaacatatctcaacc
ggagtacttactgcaaaaattagttggcgtgactatttaacaaaggtcagagattcacca
gtgtattcagcaattgtatcaaactcttctggggctactccaaaagatttatttgaagac
gctgttgatgatttgcagaaacagcaccgagagctcaaatcccggataaaacattgcttg
aagcgtggaaagataactttatcatccgcatcaacatttgacgagttcaaggtctcagtt
tcagaggaaattagctttcctgtatcagatgttaatctgaagttagtttttgatgatttg
cttgagagggtgaaagaaaaggaagggaaggaagctaagaaatgtaaacgtcttgctgaa
gacttggtggatattcttcgttctttcaaggatataactgcatcgtcatcctgggaagac
tgtaaacatcttgttgaaggtagtcaagagtgcaggtccgtaggagatgaggacttccgg
aggcagacattcgaggattatgtgtcacacctgaaagagcgagcgacagaaatcaaacgg
agagaagaggaaaaggtaaaggaggctgtgagagaagacaaaaagaaggcaaaacacaga
agagatgacagtaaagatggccatgaggaagcttcagttgatgattatgacaatcatgat
ttggttgaaggccatgggaaagagggtagaagatcggcaagaggcagtggtaatagacat
cgagaccgacatggtaattttaaggaaaacgagacaagccgcaagaatggaacccataaa
aatggtggtagtcacgacaaatctagacaaaggcggcagacatccacaccagaagcggag
ggtgaaagcagggaaaaacgacgcagaaaggacgaagaaaatggcgaaaagaggcgtaaa
aaggacgacgacaaaaatggtatggaaggaaactgtgaggaggaggagctcgaagatgga
gagtgtggtcgatattga
DBGET
integrated database retrieval system
