Tarenaya hassleriana (spider flower): 104826553
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Entry
104826553 CDS
T04125
Name
(RefSeq) CCR4-NOT transcription complex subunit 10-like
KO
K12607
CCR4-NOT transcription complex subunit 10
Organism
thj
Tarenaya hassleriana (spider flower)
Pathway
thj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
thj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104826553
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
thj03019
]
104826553
Messenger RNA biogenesis [BR:
thj03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
104826553
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_19
TPR_2
TPR_14
TPR_12
TPR_CcmH_CycH
ARM_TT21_N
TPR_1
HEAT_Nup120
Motif
Other DBs
NCBI-GeneID:
104826553
NCBI-ProteinID:
XP_010557608
LinkDB
All DBs
Position
Unknown
AA seq
816 aa
AA seq
DB search
MDSRDSLSASASDVGRDGSASDEDSVLVVTSRLAKDAVLYFQSGKFSECIGVLNQLKQMK
ENDPKILHNIAIAEYFRDGCSVPTKLLEALNRVKKQSDELARATREQVDAANPGNKTVGT
KESSTNGQSSSTSCNDEFDNTVTVFNIAITRFHLHDYGKALSILEHLFQNIEPLDETIAL
QICFLLLDVALACRDASKFAAVLNYMEKTYGVGCGSQVENGNSVQLSTNQVSKIASLQTS
SLASDSANSDLAAGESTLSRSLSEETLEYDNGLAEIGEQSLTKQVDRFPANNVVKAIGDR
SISAVDLKLELQLYKVRFFLLTRNLKLAKREVKHAMNIARSRDSSVNIDRGRDSSVALLL
KSQLEYARGNHEKARKLVFASGETKTSIMYNNNIGCIDYQLGNYQTSTLSLSNAYRACLS
PRKEKATKLLSLSQDKSMLVTYNCGLLYLASGKPGVAVRCFEKATCVFRKQPLLWLRIAE
CCLMDLKMRLLEKGRSEIKVQVYGKGKWRHLLIKEKERVEVTSPDQSKLSLINARAYLKK
ALRLLNKSSVNGSKSDHQVEPSSVRKESIEESSSDPTGMALGSGQANTNTSMKETKGGTN
QDMIRNSLSLYEDVRARENHMMKQALLANTAFVELELEDYVKALPAAKSLLELPECSKIY
VFLGHIYAAEALSLQNKAEEAAKHLSVYLHGQDSIELPFIQEDLNQWRFHRSVDCEERKD
SSTGEAKDNTAFLSPEEARGSVYANLAAMRAIRGDFDRAQQLVSQALSILPNNVQATLTG
IYIDLKLGKTQDAVARLKQCNRVSFLPAKLELNRNS
NT seq
2451 nt
NT seq
+upstream
nt +downstream
nt
atggattcgcgagattccttgtccgcttcagcttccgatgtcggcagagatggttccgct
tccgacgaagactccgttcttgttgttacctccagacttgctaaggacgctgttctgtat
ttccagtccggcaagttctctgagtgtatcggtgttctgaatcagctcaagcagatgaaa
gagaacgatcccaagattcttcacaatattgcaattgcggagtactttagagatggctgc
tcagttcctacgaagctgctggaagcccttaaccgtgtcaagaaacagagtgatgagctt
gctcgtgcaaccagagagcaagttgatgctgccaaccctggaaataaaactgtggggaca
aaagagagtagcacaaatggacaaagttctagcacttcttgcaatgatgaatttgataat
actgtgacagtattcaacattgcgattacccggtttcatctgcatgactatggaaaagcg
ttatcaattttagaacatttgtttcagaatatcgagcctctggatgagacgattgctctt
caaatctgttttttgttgctcgatgttgcattagcttgccgtgacgcttcaaagtttgcg
gctgtgttaaactacatggagaaaacttatggtgttggctgtgggagtcaagttgaaaat
ggaaactctgtacaactttctacaaaccaggtatcgaaaatagcctctctccaaacaagc
tcgttggcctcagattctgcaaattctgatttagcagctggtgaaagtacgttgtctaga
agtttgtcagaggaaactctagaatatgacaatgggcttgcggaaattggggagcaaagc
ttgactaagcaagttgaccgttttcctgcaaacaatgttgtcaaggccataggtgacaga
tcgatctccgctgttgatctgaagctcgagttgcagctttacaaggttcggttctttctt
ctcaccagaaacttgaaactagccaagcgggaggtcaaacacgcaatgaacattgctcga
tcaagggactcatctgtgaacattgatcgaggaagggactcatctgtggcactcctcttg
aaatcccagcttgaatatgctcgtggaaatcatgaaaaagccaggaaactggtgtttgct
tctggtgaaacaaagacttcaatcatgtacaacaacaacattggttgcatagactatcag
ctcgggaattatcaaacttctaccttatctctttccaacgcttaccgtgcttgcctgtca
cctcgcaaagagaaggctacaaagttactctctttgtcacaggataagtctatgttggta
acatataactgcggtttgctttatttggcttctgggaagcctggagtcgctgttcggtgt
ttcgagaaggcaacctgtgttttcagaaaacaacctctcttatggctccggattgctgaa
tgctgtctgatggatttaaagatgcgtcttttggaaaaaggaagatcggaaattaaggtt
caggtttatgggaaaggaaaatggagacaccttctgattaaagaaaaggagcgtgtggaa
gttacttcccctgatcaatcaaagctttcattgatcaacgctcgggcttatctcaagaag
gctttgcgtttgctaaacaagtccagcgtcaacgggtctaagtcagaccatcaagtggaa
ccttcctcggtgagaaaagaatccatagaagagtcatcctcagatccaactggtatggcc
ttgggttcaggtcaagctaacacgaacaccagcatgaaagaaacgaaaggaggaactaac
caagacatgattcggaactccctctcgttgtacgaagatgtccgtgctcgggagaaccac
atgatgaagcaagcccttctcgcgaatacggcattcgtcgagctggagttggaagattac
gttaaagcattacccgcagcgaaatccctcttggaacttccggaatgttccaagatttat
gtcttcctgggtcatatatatgccgccgaggctctcagcttacagaacaaagcagaagag
gctgctaagcatttatcggtctatctccacgggcaggacagcatcgaacttcctttcatc
caagaagaccttaaccaatggcgctttcacagaagtgtagattgtgaagaacggaaggat
tcttccacgggagaagctaaagataataccgcctttctcagcccagaagaagcccgtggg
tcagtttatgcgaacctagccgccatgcgcgcgatacgaggagattttgaccgtgctcag
caattggtatcacaagcactgtcaattttaccgaacaacgtgcaagctactcttaccggg
atatacatcgacctcaagctcgggaagacgcaagatgctgtggctcggttaaaacagtgt
aaccgcgttagcttccttccggccaagttagagttgaacagaaattcgtag
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integrated database retrieval system
