Tarenaya hassleriana (spider flower): 104826780 Help Entry 104826780         CDS       T04125                                  Name (RefSeq) pre-mRNA-splicing factor prp12   KO K12830   splicing factor 3B subunit 3 Organism thj  Tarenaya hassleriana (spider flower) Pathway thj03040   Spliceosome Brite KEGG Orthology (KO) [BR:thj00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     104826780  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:thj03021]     104826780    03041 Spliceosome [BR:thj03041]     104826780    03036 Chromosome and associated proteins [BR:thj03036]     104826780 Transcription machinery [BR:thj03021]  Eukaryotic type   RNA polymerase II system    Coactivators     SAGA/TFTC/STAGA complex      104826780 Spliceosome [BR:thj03041]  Complex A   U2 snRNP components    U2 snRNP specific factors     104826780  Complex B     104826780  Complex C    U2 SnRNP specific factors     104826780 Chromosome and associated proteins [BR:thj03036]  Eukaryotic type   Histone modification proteins    HAT complexes     STAGA complex      104826780     TFTC complex      104826780 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Beta-prop_RSE1_2nd Beta-prop_RSE1_1st CPSF_A Motif Other DBs NCBI-GeneID:  104826780 NCBI-ProteinID:  XP_010557959 LinkDB All DBs Position Unknown AA seq 1376 aa AA seqDB search MAVPEEESYAKSQSTSATAAAAAAPSSSGDVCYLAKCVLRPSVVLQVAYGYFRSRSFRDI VFGKETCIELVSIGEDGIVQSVCEQSVFGTIKDLAVIPWNNEFHMRSTQISGKDLLAVIS DSGKLSFLSFSNEMHRFSPVSHVQLSSPGNSTLQLGRMLAVDSSGLFLAASAYHDHFGLF SLSTSSVGDIINERIFYPSENSGDIISEQAISGSIWSMCFISKNLHEPSKEYDPVLAIVL NRKGSLMNDLVLFRWNVKEQSICLMSEYAEPGALSHTIVEVPHSYGFAFLFRVGDALLMD LRDAQNPCCLFRTSLDLVPASLGEDHFVEESCRVQDGDDEGLFNVAACALLELRDYDPMC IDSESGIGKLGSKHVTSWTWEPENYCNPRMIFCLDDGEFFMFELTYDSNGMKVNLSECLH KSLPCKEILWVEGGLLAAFVEMADGVVFKVETGKLHWVSPIQNIAPILDMSIVDDQNEKR DQMFACCGVTPEGSFRIIRSGISVEKLLKTAPIYQGITGTWTVRMKLTDIYHSFLVLSFV EETRVLSVGLSFKDVTDSVGFQPDVCTLACGLAANGLLVQIHQNAVRLSMPTEDAHSDGI TVSSPFCTSWFPDNVSISLGAVGENLIVISTSNPWFLSVLGVKLLSSNYYEIYEMQRLTL QYEVSCISIPQRHIGKKRLYPSTTLNLSDNSYAATIPAGMDGGYTFVIGTHKPSVEVLSC SEDGDGLRILASGLILLTNTMGTAINGCIPQDVRLVLVDQFYVLCGLRNGMLLRFEWPTF PPSSGLHFPDSVSHSEEVMDTVLGEKSLSPINLLLIATRRIGITPVFLVPFSDSLDSDII ALSDRPWLLQTARQSLSYTSISFQPSTHATPVCSSDCPQGILFVAENCLHLVEMVHSKRL NVQKFQLGGTPRKVIYHSESKLLIVMRTDLQDTCASDVCCVDPLSGSVLSSYKLKHGETG KSMELLRVGNEQVLVVGTSLSSGPAILPSGEAESTKGRLIILCIEHTQNSDSGSVTFCSK AGSSSQRMSPFRDVVGHTTEQLSGGSFCSSPDDNSSDGIKLDEVEAWQLRLASATTWPGM VLAICPYLDRYFLASAGNAFYVCGFPNDNPERMKRFAVGRTRFMITSLNTYFTRIAVGDC RDGVLFYSYHEDVKKLYQTFSDPSQRLVADCLLMDANTAAVSDRKGSVAILSCTDRSEYE YSSPESNLNLNCAYYMGEIAMTIRKGCYVYKLPADDVLKSYGLSISIDTVQNTIIAGTLL GSIFIFVPISREEFKLLEAVQARLAVHPLTAPILGNDHNEFRSRENPAKAKKILDGDMLA QFLELTSIQQEAVLMADVPSPSCLKSSSKLQHSPSSLVLQLHQVVQLLERVHYALN NT seq 4131 nt NT seq  +upstreamnt  +downstreamnt atggcggttccggaggaggaatcctacgctaagtctcaatcgacgtcggccacggctgcg gcggcggcagctccgtcgtcttccggcgacgtttgctacctcgccaaatgtgtcctccgc ccaagcgttgttctccaggtcgcctatggctactttcgctccaggtccttccgcgacatc gttttcggcaaggagacctgcatagaattggtatctattggtgaagatgggattgttcaa tctgtttgtgagcagagtgtttttggaacaattaaggatttggccgtcataccttggaat aatgaatttcatatgagaagtacacagatatcaggaaaagaccttttggcagttatttct gattctgggaagctctcatttctctcatttagcaatgaaatgcacaggttctctcctgtg tcacatgttcaactttctagtcctggaaactctacgcttcaacttggccgaatgcttgct gttgattccagtggtctctttctcgctgccagtgcgtaccatgatcactttgggctattt tccctttcaacatcatctgtgggtgatattattaatgagaggatattttatccttctgaa aacagcggggacatcatttcagaacaagcaatatctgggtccatttggagtatgtgtttc atttctaaaaaccttcatgaacctagcaaggagtatgaccctgttcttgccattgttttg aataggaaagggtctctcatgaatgatctggttttgttcagatggaatgtcaaagaacaa tccatatgtttaatgtcagaatatgccgagcccggagcactatcacatactattgttgaa gttcctcattcctatggatttgcttttctcttcagggttggtgatgctctcttaatggat cttagggatgctcaaaacccttgctgtttgtttaggacgtctttagatctcgtgcctgct tctttaggggaagatcattttgtagaagagtcatgtagagtgcaagatggagatgatgaa ggtctttttaatgttgctgcatgtgcattgttggagctcagggattatgatcccatgtgc atagatagtgaaagtggcatcgggaagttgggttccaagcatgtgacttcatggacttgg gagccagaaaattattgtaacccccggatgattttttgcttagatgatggagaatttttc atgtttgaactcacttatgactctaacgggatgaaagtgaatctgtcagagtgtttgcac aagagcttaccatgcaaggaaattttgtgggttgaaggtggattactggctgcattcgtt gaaatggcagatggagtggttttcaaagtggaaaccggtaagctacattgggtgagtccg atacaaaatattgctccaatcttggatatgtcgattgtggatgaccagaatgagaaacgt gaccaaatgtttgcttgctgtggtgtgacacctgaaggctcctttagaattattcgaagt ggcatcagcgtagaaaagcttctgaaaactgctcctatttatcaaggaataactggtact tggactgttcggatgaagcttaccgatatttaccattcatttcttgtgttgtcatttgtt gaggagacaagggtcctgtcagttggattgagttttaaagatgtgactgattctgtcggt ttccagcccgatgtctgcaccttggcatgtgggcttgcagccaatggactgttagttcaa attcaccaaaatgcagtaaggcttagcatgcccaccgaggatgctcattctgacggtatt actgtttcttcaccattttgtacctcttggtttccagacaatgtaagtattagtctgggg gcagttggagaaaatttaatagttatctctacatccaatccttggtttctgtctgttctt ggggttaaattgctctcttccaattattatgaaatctatgaaatgcaacgattgacattg cagtatgaggtttcctgcatctccattcctcagagacatataggaaagaaaagactctat ccttctaccacattgaatttatctgataatagctacgccgctacaattcctgctggtatg gatggaggctatacatttgtaattggcacacataagccttctgtggaggttctgtcctgc tcagaagatggtgatgggttacgaattcttgcttctgggttgatattgttaacaaatact atgggaacagccataaatggatgcatcccgcaagatgtaagacttgtattagtcgatcag ttttatgtcctatgcggtttgagaaatggaatgctacttcgttttgagtggcctactttt ccaccttcatccgggttgcattttccagattctgtcagtcactctgaagaagtgatggac actgttctgggtgaaaagagcctttcacccatcaatcttttgttaattgccacccgtcgc atcggcatcactcctgttttcctggttcctttcagcgattcactagattcagacatcata gctcttagcgacaggccatggttgttgcaaacagcaaggcagagtctttcttatacttcc atctcattccaaccttccactcatgcaactcctgtgtgttcatctgattgtcctcaagga attctttttgttgcagagaactgtctacatctagtggagatggtgcacagcaaacggcta aatgtgcagaagtttcagcttggaggcactccgcgaaaggtcatatatcatagtgaaagc aaactattgattgtgatgagaactgatttgcaggatacttgtgcatctgatgtatgctgt gtggatccacttagtgggtcagtgttgtcatcgtataagctcaaacatggagaaactgga aagtcaatggaacttttacgcgtgggaaatgaacaagtccttgtggttgggacgagttta tcgtctggtcccgctatactgcctagtggtgaagctgaaagcacaaaaggccgattaatt attctctgcattgaacacacacaaaactcagatagtggttcagtgacattctgttcaaag gctggatcgtcttcccaacgcatgtcaccttttcgtgacgttgtgggacacaccacggaa caactatctggaggtagtttctgcagcagtccagacgacaacagttctgacggaattaaa cttgatgaggtcgaagcatggcagttgagattggcctctgcaaccacttggccaggaatg gtacttgccatctgtccatatcttgatcgttacttcctggcatctgctggcaatgctttt tatgtatgtggtttcccgaatgataaccctgagagaatgaagaggtttgcggtaggaagg acacgcttcatgataacatctctgaatacatatttcactagaatagccgttggggattgc cgtgatggtgtccttttctattcttatcacgaggacgtgaagaaactgtaccaaacattt tctgatccatcacaacggttagttgctgattgcttactgatggatgccaataccgctgct gtatctgatcgtaaggggagtgtagctatcttatcttgcacagatcggtcagaatatgaa tattcaagtccggagtccaacctaaacctgaactgtgcttattacatgggtgagatagcc atgaccatcagaaaggggtgttatgtttacaaacttcctgccgatgatgtgctgaagtct tatggtctcagcataagtatcgacacagtgcagaacacaatcatagctggcacgctatta gggagtatattcatatttgttcctatatcaagggaggaattcaaacttctagaagctgtc caggctaggcttgcggtccatccactgactgcacctattctcgggaatgatcataatgag ttccgaagtcgtgagaatcctgctaaggcgaaaaaaatcttagacggtgatatgcttgct cagtttctggagcttactagtatacagcaagaggcggttttaatggcagatgtgccatct ccaagttgtttgaaatcaagttcaaaacttcaacattctccttcctcactcgtgttacag ttgcaccaagtcgttcagttactggagcgtgtccactatgccttaaactaa

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