Tarenaya hassleriana (spider flower): 104826841
Help
Entry
104826841 CDS
T04125
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 18
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
thj
Tarenaya hassleriana (spider flower)
Brite
KEGG Orthology (KO) [BR:
thj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
thj03009
]
104826841
Enzymes [BR:
thj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
104826841
Ribosome biogenesis [BR:
thj03009
]
Eukaryotic type
Pre-60S particles
Helicases
104826841
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DUF4217
ResIII
RNA_pol_Rpc4
PA26
Motif
Other DBs
NCBI-GeneID:
104826841
NCBI-ProteinID:
XP_010558064
LinkDB
All DBs
Position
Unknown
AA seq
592 aa
AA seq
DB search
MDSSANTRNKALTETRFSDLDPPLSGEILEALAQSGFEFCTPVQAATIPLLCNYKDVAVD
AATGSGKTLAFLVPLVEILRRSSSYPPKPHQVLGIIISPTRELSTQIYNVAQPFVSTLTN
VNSVLLVGGREVKTDMKTIEEGGANLMIGTPGRLYDIMERMENLDFRNLEILILDEADRL
LEMGFQKQVNYIVSRLPKLRRTGLFSATQTEGVAELAKAGLRNPVRVEVRAESKANSSQQ
LANSKTPSGLHLEYLECEADKKSSQLVDLLIKNKTKKLIVYFMTCACVDYWGLVLPQIPS
LKSLCLIPIHGDMKQKARDKALASFTDASSGVLLCTDVAARGLDIPGIDCIVQYDPPQDP
NVFIHRVGRTARLGRQGSAIVFLSSKEEAYVEFLRIRRVPLQEKKCSEEASDVTPLIRSA
ALKDRAVMEKGLKAFVSYVRAYKEHHCSYIFRWKELEIGKLAMGYGLFQLPSMPEVKNHK
LSIDGFTPAEGINFEAIKYKDKSREKQRKKNLQAKKEKQEQQKPEKAKKTSNKAANNDSA
AVRKLTAKQRRTIQNVEDEEEMARDYRLLKKLKKGAIKEDEFDKLLGTDDLV
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atggactcgtcggcgaacaccaggaacaaggcgttgacggagacgcgtttctccgaccta
gatccgcctctctccggagagatcctggaggcgctcgcacagtccgggttcgagttctgc
actccggttcaggccgcgaccatccccttgctctgcaactacaaggatgttgccgtcgac
gccgccaccggttccggaaaaaccctagctttcctcgtccctctcgtcgaaatcctccgt
cgctcctcttcttacccgccaaaacctcaccaggtcttggggataattatatcaccgaca
agggagttatcaacacagatatataatgtggcacagccttttgtttcgactttgacaaat
gtgaactcagtgctacttgttggaggccgagaagtgaagacggacatgaagaccatagaa
gaaggaggagccaatcttatgatcggtacacctggaaggctttacgatataatggaacga
atggagaatcttgattttcgaaaccttgagattcttatattagatgaggctgataggctt
ttggagatgggattccagaagcaggtgaattatattgtatctcgcttgccgaagcttcgt
aggactggccttttttcagccacacaaacagaaggtgtagcagagctggctaaggccggg
cttagaaatcccgtgagggttgaagttcgagctgagtcgaaagcaaattcatctcaacag
ttggcgaactcaaagaccccttccggtcttcatctcgagtatttagaatgtgaagcagat
aagaaatcatcgcagcttgtggatctcctcatcaagaacaaaactaaaaagcttatagta
tacttcatgacttgtgcttgtgttgattactggggactcgttcttccacaaattccttct
ctgaagtctttgtgtttaatacccatccatggggatatgaagcagaaagcaagagataag
gccttagcttcatttacagatgcatctagcggtgtccttctatgcacagatgttgctgca
cgtgggctcgatattccgggcattgattgcattgtgcagtatgatcccccacaagatcca
aatgtattcatccacagggttgggagaactgcaaggttgggaagacaaggaagtgccata
gtgtttctatcgtccaaggaggaagcctatgtagagttcttacgcataagaagggttcct
cttcaggagaaaaagtgcagtgaggaagcatctgatgtcactccccttataagatcggct
gcactgaaggaccgagcagtgatggagaaaggactgaaagcgtttgtttcctacgttcgt
gcttataaagagcatcattgctcttacattttcagatggaaagaacttgaaatcggaaag
ttggcaatgggatatggcctttttcagcttccgtcgatgcccgaagtgaaaaatcacaaa
ctttccatcgacgggtttacaccggcagaaggcatcaactttgaggccataaaatacaag
gataaatctagggaaaagcaaagaaagaagaacctgcaagcaaagaaagaaaaacaagaa
caacaaaagccagagaaggccaagaaaacctcaaacaaggctgctaacaacgactcagcc
gccgtgagaaaattaacggctaagcagcgacgaacaatccaaaatgttgaagacgaggaa
gagatggcccgagactaccggttactgaaaaagctgaagaaaggtgccatcaaagaagac
gaatttgataagctattaggaactgacgatttagtttga
DBGET
integrated database retrieval system
