Tarenaya hassleriana (spider flower): 104826958
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Entry
104826958 CDS
T04125
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH3
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
thj
Tarenaya hassleriana (spider flower)
Pathway
thj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
thj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104826958
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
thj03019
]
104826958
03012 Translation factors [BR:
thj03012
]
104826958
Enzymes [BR:
thj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
104826958
Messenger RNA biogenesis [BR:
thj03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
104826958
Translation factors [BR:
thj03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
104826958
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
dsrm
DEAD
ATPase
nSTAND3
AAA_22
T2SSE
AAA_14
ABC_tran
PhoH
Myosin_head
Motif
Other DBs
NCBI-GeneID:
104826958
NCBI-ProteinID:
XP_010558246
LinkDB
All DBs
Position
Unknown
AA seq
1151 aa
AA seq
DB search
MRFTKQISLFLGQTTKIRCRPFSSNPSLSRSYLAGRSISVSGSTLFLIPKCSGCIGGSFF
PIRRRLWGHAAEQFSDDEYECEFEEHKASSSVANIDEWKWKLGMLLRNENEQEIVSRDKR
DRRDYEQISNLAKRMGLYSEIYGKVVVASKVPLPNYRPDLDDKRPQREVVLPLGLQRRIE
GLLQEHLDRQQLNSGKNGESSAEPQPNKQTEEIPDENSYSFLDGSLMEKVLQKRSLRMRN
MQRGWQESAEGKKMMEFRKSLPSFKEKERLLQAIAQNQVIVISGETGCGKTTQLPQYILE
SEIESGRGALRVSAERGEPLGETVGFKVRLEGMKGKNTHLLFCTSGILLRRLLSDRNLSG
ITHVFVDEIHERGMNEDFLLIVLKELLPRRPDLRLILMSATLNAELFSNYFGAAPKIHIP
GFTYPVKAHFLEDVLEMTGCKLTSFNQIDDYGQEKTWKTQRQLMPRRRKNKITILVEEAL
SKSNFENYSSRTRDSLSCWMPDSIGFNLIEAVLCHICRKERPGAILVFMTGWDDISSLRD
QLKAHPLLGDPNRVLLLTCHGSMATAEQRLIFERPPPDIRKIVLATNMAEASITINDVVF
VVDCGKAKETTYDALNNTPCLIPSWISQASARQRKGRAGRVQPGECYHLYPKCVYDAFAE
YQLPELLRTPLNSLCLQIKSLQVESIGEFLSAALQAPEPLAVQNAIEFLKKIGALDEKEN
LTNLGKFLSILPVDPKLGKMLIMGAIFRCFDPILTIVSGLSVRDPFLLPQDKKALAGTAK
AKFSAKDYSDHMALVRAYEGWKTAEREGSAYEFSWRNFLSAQTLQAIHSLRKQFSYILKE
AGLVVDDSSVNNKLSHNQHLVRAVICSGLYPGIASVVHRETSMSFKTMDDGQVLLYANSV
NSRYETIPYPWLVFGEKVKVNAVFIRDSTGVSDSILILFGGALSNGVQLGHLKMLDGYID
FFMDPNLAESYVKLKEELDKLLQKKLEDPSIDIHKEGKYLMLAVQELVSSDQCEGRFVFG
RDTKRPNQPKSGEEKFSRDGTNPKSLLQTLLMRAGHSPPKYKTKHLKTNEFRALVEFKGM
QFVGKPQKNKQLAERNAAVEALAWLTHTSENGSNLDDGNQVDSSPVDVTDNMLKLLGGRR
RRRRSKGRFCV
NT seq
3456 nt
NT seq
+upstream
nt +downstream
nt
atgcgattcacgaagcaaataagcctctttttggggcagacaacaaagattcgctgtcgg
cctttctcttcgaatccatctctgtcgagatcgtatctcgccggcaggagcatctcggtg
tctggttcgactctgtttcttatcccgaagtgtagtggttgtattggcggaagtttcttc
cctattcgtcgtcgactctggggacatgctgccgagcagttttcggatgatgagtacgag
tgtgaattcgaggaacataaggcatcatcctcagtggccaatatagatgagtggaagtgg
aaactgggaatgctgttgcggaatgaaaatgaacaagaaattgtatctagggataaaaga
gatcgaagagattatgaacagatctcgaatctggccaagaggatgggactgtacagtgag
atctatgggaaagtggtggttgcgagcaaggttcctcttcccaactatcgcccagacttg
gacgataagaggccacaacgagaggtggtccttcctttgggtttgcagagaaggatcgag
gggctgcttcaggaacaccttgataggcagcagctaaactcagggaaaaatggtgaaagt
tcagctgagcctcagcctaacaagcagaccgaagaaattcctgatgaaaactcctattca
tttcttgatgggtcgttaatggaaaaggtgcttcaaaagaggagtttacgcatgcgtaat
atgcagagaggctggcaggaatctgctgagggaaagaagatgatggagtttcggaagtcg
ttaccttcattcaaggaaaaagaaagacttcttcaagcaattgctcagaaccaggtaata
gtgatttctggggagaccggatgtggtaagacaactcaacttccgcagtacattttggaa
tcagagatagagtctggtcggggagcattaagagtgtcggcagagagaggagaacccctc
ggtgaaacagtcgggttcaaagttcgattggaagggatgaaaggaaagaatacccatctg
cttttctgtacaagtggtattctactcagacggctgctcagtgatcgcaacttgagtggc
ataacacatgtttttgttgacgagattcatgagcgaggcatgaacgaagattttctatta
attgtgttgaaggagcttcttccacggcgtccagatttgagattgattctgatgagtgcc
actttaaatgccgaactcttttccaattattttggtgcagcaccgaaaattcacattcct
ggcttcacgtatccagtgaaggcgcattttttggaggatgttcttgaaatgactggatgt
aagctaacatctttcaaccaaattgatgattatggccaagaaaagacgtggaaaacacaa
cggcagctaatgccacgcagaaggaaaaacaagatcactattcttgttgaggaagctctc
agcaaatcaaattttgaaaactatagctcccggacacgtgattcactttcatgttggatg
cctgattctataggatttaatctcatcgaggcagttctttgtcacatatgccggaaagaa
cgtccaggcgctatattagtatttatgactggatgggatgatatcagctctcttagggac
caacttaaagcccaccccctcttaggtgatccgaacagggttctgcttttgacatgccat
ggctcaatggcaactgcagaacagaggctcatttttgagagaccacctcccgatatacgc
aaaattgttcttgctacgaatatggcagaagcaagtatcacgataaacgatgtagttttt
gtggttgattgcggaaaggcgaaagagaccacatacgacgctctgaacaatacaccgtgc
ttgataccgtcgtggatatctcaggcttctgctcggcagagaaagggaagagcagggcgg
gtacagcctggagaatgttatcacctatacccgaaatgtgtttatgatgcttttgctgag
tatcagcttcctgaacttctgagaactccattgaactccctctgcttgcaaattaaaagt
ctacaggttgaaagcattggagaattcttgtctgctgctcttcaggctcctgaacctttg
gctgtgcaaaacgctattgagtttctgaaaaagattggagcactagatgagaaggaaaat
ctgacaaatcttggaaagttcttatcaatccttccggttgatcccaagttggggaaaatg
ctaataatgggcgctatcttccgctgctttgatcctatacttaccattgtatccgggctt
agcgtcagagatccttttctcctaccgcaagacaaaaaggccttagctggaacagcaaag
gcgaaattctccgcaaaagactatagtgaccatatggcgcttgttcgcgcctatgaaggt
tggaaaaccgcggagagagaaggatcggcgtatgagttctcgtggaggaatttcctctct
gctcaaacccttcaggcaatacattctctgaggaaacagttcagttatattctgaaagaa
gctggtttagtggtagacgattcatcggtaaacaacaagctaagtcacaatcaacatctt
gtgcgtgctgtcatttgctctggcctttaccctggaatagcatctgttgtgcacagagag
acttccatgtctttcaagacaatggatgatggtcaagtattattatatgcgaactctgta
aattctcggtacgagactattccgtacccgtggttagtctttggcgagaaagtaaaggtg
aatgcagttttcatccgggattcaactggtgtctctgattccattctgatccttttcggc
ggcgccttgagcaatggggtgcagctggggcatctgaaaatgcttgatgggtacatcgat
ttcttcatggacccaaacttggcagagtcctatgtgaagctgaaggaagaactcgacaag
cttctccagaaaaagcttgaagatccgagcattgacatccacaaagaagggaagtatctc
atgctcgcggtccaagaactcgtgtcctcagaccaatgcgaaggaagatttgtcttcggt
cgggacaccaagagaccaaaccaaccaaaatccggggaggagaaattctcgagagacgga
acaaacccgaaaagcctgcttcagacgcttctgatgagagcaggacactccccaccaaag
tacaagacgaaacatctgaagacgaacgagttcagagcgcttgtggagttcaaaggcatg
cagttcgttggcaagcctcagaagaacaaacagctcgccgagagaaacgcagccgtcgag
gctttggcctggttaactcatacctcggaaaatggctctaaccttgacgatggaaaccag
gttgattcttctccggttgatgtcactgacaatatgctaaaactcctgggaggacgccgc
cgccggcggagatccaagggcaggttctgtgtctga
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integrated database retrieval system
