Tarenaya hassleriana (spider flower): 104827188
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Entry
104827188 CDS
T04125
Name
(RefSeq) DNA repair protein RAD4 isoform X1
KO
K10838
xeroderma pigmentosum group C-complementing protein
Organism
thj
Tarenaya hassleriana (spider flower)
Pathway
thj03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
thj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
104827188
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
thj03400
]
104827188
DNA repair and recombination proteins [BR:
thj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
104827188
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BHD_3
Rad4
BHD_1
BHD_2
Transglut_core
Motif
Other DBs
NCBI-GeneID:
104827188
NCBI-ProteinID:
XP_010558599
LinkDB
All DBs
Position
Unknown
AA seq
913 aa
AA seq
DB search
MKSRSQGRSGRLAEASGEGVSKVLRRTSARGCRGKKRQDDNVEQCDVASDQRQNGKGKQA
AETRLTDNALEGMGCSSKSGNSFAGGDDDEINDSDWEECSIPSLDHTVNASVDDIRELRI
EFDGVPDAKSQKHVYRATAEDKERAELVHKVHLLSLLARGRIVDKACDDPLIQASLLSLL
PSYLSKVSVFSKITVKDIAPLLRWFRGVFSVRDELRSGKSFSSSLAFAFESRQGTTEELA
ALTVALFRALKLTTRFVSILDVASLKPGVDKDESSGQNRNKMNLGIFGTSTLMVSTSPVK
SENEKLREKSKKDSAMRKDDCSTSNKNTQPSFSIGTNPQCELPPSSNQFKDKMDSSSEAE
TCCKPDGTRRKGDLEFEMQLAMALAATAAANTQDAPRSDEKSLSSSSSKATKKIENASVS
DQVISTAVGSKKVGSPLYWAEVYCNGENMDGRWVHFDAVNGMIDAEQSIEAAADACKASL
RYVVAFAGGGAKDVTRRYCTKWHKIASKRVSPQWWDLVLAPLRQLESAATGGSVNMEKEP
LDANDPIPVTNKASTSSSSIGIRSALEDMELATRALTEPLPTNQQAYKNHELYAIEKWLR
KNQILHPKGPILGYCSGHPVFPRTCVQTLRTKERWLREGLQVKPDEVPEKILRRNSKHKK
VVNFEDGEKDGEGGSQCMELYGKWQLEPLRLPHAVNGIVPKNERGQVDVWSEKCLPPGTV
HIRLPRIFLVAKRLGVDYAPAMVGFDYKNGRPTPVFDGIVVCTEFKDAILQAFGEEEERR
EAEEKRRNEARAATRWYQLLSSILTREKLKTRYLDSNQPDGIQASSAGPKAETVVESPGS
SRRGSKRPRPGLRRGETSKGDDYNDNSRRVKGLVGESEGHEHVFLVEEETFDEGSLLKTK
RCRCGFAVQVEQM
NT seq
2742 nt
NT seq
+upstream
nt +downstream
nt
atgaagtctagaagccaaggcaggagcggtagacttgcagaggcatcgggagaaggggtg
agcaaggtcctcagacgaacaagcgcacgtggctgtcggggcaagaagagacaagatgat
aatgtcgagcaatgtgatgtggccagtgaccaaaggcaaaatgggaaaggaaaacaagct
gctgagacacgattaactgataacgctttagaaggcatgggatgcagtagtaaaagtgga
aactcatttgcgggcggtgatgatgatgaaattaatgattcagactgggaggaatgttca
attcccagtctggatcatactgtcaatgcttccgtcgacgacatacgagagttgaggata
gaatttgatggtgtaccagatgctaagagccagaagcatgtttatcgtgcaactgctgaa
gacaaggaacgtgcagagcttgtccataaggttcatttgctcagtctacttgccagagga
aggatagtagacaaagcttgcgatgatccactaattcaggcgtccttgctttcacttcta
ccatcatatttgtcgaaagtgtcagtcttctcaaaaatcactgttaaggatatcgctcct
cttctccgttggtttcgcggcgtcttttctgtcagagacgaactccgttctgggaaatct
ttcagttcttccctggcctttgcttttgaatcccgtcaaggcacaactgaagagcttgca
gcattgactgttgctttatttagagcattgaagctcacaactcggtttgtatctattctt
gatgttgcctccttaaaaccaggggtcgataaggatgaatcttctggtcaaaacagaaat
aaaatgaatcttgggatatttggtacttcaactcttatggtctcaacatcccccgtcaaa
tctgaaaacgaaaagctccgggaaaaatctaaaaaagattcagcaatgcgaaaggatgac
tgctcaacgagcaacaagaatacccagccaagcttctcaatcggcactaacccccagtgc
gaacttcctccaagttcgaatcagtttaaagataaaatggattcatcatctgaagcagaa
acatgctgcaaacctgatggaacaaggaggaaaggggaccttgagttcgagatgcaatta
gccatggctcttgctgctactgcagctgctaatacacaagatgccccccgatcagatgag
aaaagcttgagtagcagttcatctaaagcaacaaaaaagatagaaaatgcatctgtgtct
gaccaagtaatatccactgcagttggttctaaaaaagtgggttctcccctctattgggct
gaagtatattgcaatggagagaacatggatggaagatgggtccatttcgatgctgtaaat
ggaatgatagatgctgaacaatcgatagaagctgctgctgatgcttgcaaagcctctctg
agatacgttgtcgcctttgctggtggtggagccaaagatgtaacccgcaggtactgtaca
aagtggcacaagattgcatcaaaacgggttagtccacaatggtgggatttggtattagct
ccgttacggcaattagagtctgctgcaactggaggttcggttaatatggagaaagaacca
ctagatgccaatgatccaattcctgttactaacaaagcttctacgagtagctcttccatt
ggcataaggagtgcccttgaagatatggagttagctaccagggcattaactgagcctctt
cccacaaatcagcaggcttataagaatcatgaactctatgctattgagaaatggcttagg
aagaaccagattcttcatccaaagggtccgattctgggatattgctctggccatcctgtc
tttcctcggacctgtgtccaaactttgaggacaaaggagagatggctacgtgaaggacta
caagttaagcctgacgaagttcctgaaaagattctgagacgtaattcaaaacataagaaa
gtagtgaattttgaggatggtgagaaggatggggaaggtggttctcagtgcatggaactg
tatggcaagtggcaactggaaccactgcgtcttcctcacgctgttaatggaattgtgccg
aagaatgaacgtggtcaagtggatgtgtggtcggagaagtgtctgccgccggggacagtg
cacataaggcttccacgaatatttttggtggctaagcgactcggagtcgactatgcgcct
gccatggttggttttgactacaagaatggacgtcctactcccgttttcgacggtattgtt
gtctgtaccgagttcaaggacgcaatcctccaggcatttggggaagaagaggaacggaga
gaagccgaagagaaaaggcgaaatgaagcacgagcagctaccagatggtatcagcttctc
tcgtcgattttaacccgcgaaaagctgaaaacccgttacctcgacagtaaccaacctgat
ggtattcaagcgagcagcgctggaccgaaagcagagaccgtcgttgaatcccccggaagc
agccggagaggatctaagcggccacggccaggcctacgacgaggcgaaacatcaaaaggt
gatgattataatgataattcacgtagggttaagggattggttggtgaatcggaaggccat
gaacatgtgtttcttgtggaggaagaaaccttcgacgagggaagcttgttgaagacgaaa
cgttgcaggtgtggcttcgccgttcaagttgaacagatgtag
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