Tarenaya hassleriana (spider flower): 104827645
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Entry
104827645 CDS
T04125
Name
(RefSeq) protein CCA1-like isoform X1
KO
K12133
MYB-related transcription factor LHY
Organism
thj
Tarenaya hassleriana (spider flower)
Pathway
thj04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
thj00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
104827645
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
thj03000
]
104827645
Transcription factors [BR:
thj03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-factors
104827645
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
Myb_DNA-bind_7
Motif
Other DBs
NCBI-GeneID:
104827645
NCBI-ProteinID:
XP_019059784
LinkDB
All DBs
Position
Unknown
AA seq
696 aa
AA seq
DB search
METNSSGEELVIKMRKPYTITKQRERWTEEEHDRFLEALKLYGRAWQKIEDHVGTKTAVQ
IRSHAQKFFSKVEKEAKAKGVPVGIALNIDIPPPRPKKKPSNPYPRKTGNRTPTSQAAAQ
VGKQATSASTVLNCKEALLLQKGSLSEYPSEELLPSNLEDDHSASSMNKSSVETMAFANG
CSFTEFLPPRKEANQDNGTRKASNSEKDCCDLHAKSVQGSAKKYVSGISHVDEEQGPQTY
TRHVPVHTIDGSSVASPISPFPTVSEGIHVCLNKFTDMSACANRSKHDNDGPRYKSRALP
AVHLASAPIPHTLDDYWSFANLFVSNPLQNPAAHAASTFAASVWPGGTSTCAEIGVPPSQ
VSSPSSLAAIAAATVSAATAWWAAHGLLPLCAPIHSAFPCHPPPTTLAPISDDNGHAPYA
NVDTKESTLQNPSVQSQDADPEHSEASKAQSSPLKTTLSPSYSEQSGSTKTETGGKPASH
EQTEAETDQNRAKNRKQVDRSSCGSNTPSSSDAEVDASEKLEKDKDEEKEVEVDVNPPAE
ESNIRRSRSSSNLSDPWKSVSDEVLGQGRLAFQALFSREVLPQSFPPRRDSKDKKDLRGN
EDGEKKKSAETEHGEGQELDLNRTAQATDSDHQEEKGDQDGYLAIGLGASKLKERTGFKP
YKRCSVDAKENRITNSSTLNRVEQKDPKRICLERRA
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atggagacaaattcttctggagaggagttggtgattaagatgagaaagccatatacaata
acaaagcaacgtgagcggtggactgaagaggaacatgatagattccttgaagccttgaag
ctgtacgggagagcatggcagaagatagaagatcatgtcggaacaaagactgctgtgcag
ataagaagtcacgctcagaagtttttctctaaggtggagaaagaggcaaaggctaaaggc
gttccggtaggcatagccctgaacatagatattcctcctccacggcccaaaaagaaaccg
agcaatccttatcctagaaagacaggaaatagaactcccacttcccaagctgctgcacag
gttggaaagcaagcaacttcagcttctactgttttgaactgtaaagaggcccttttatta
cagaaagggtcactctctgagtatcctagtgaagaattgctgccatctaacctggaagat
gatcactctgcatcctccatgaataaaagctctgtggagaccatggcatttgcaaatgga
tgcagctttacggaatttttacctccgcgaaaagaggcaaatcaggataacgggacgaga
aaggcttcaaactcggagaaagactgttgtgatttgcatgcaaaatctgtacaaggatcg
gcgaaaaaatatgtcagtggcatatcccatgtggatgaggagcaaggacctcagacatat
acaagacatgtccctgttcacacaatagatggaagctcagtagcatctcctatatcacct
tttcccacagtttcggaaggaattcatgtctgcttgaacaagttcaccgatatgtctgca
tgtgctaatagatctaaacacgataatgatggcccgagatataaatctcgtgcgttgcca
gctgttcatctggcctctgctccaataccccacaccctggacgattactggtcatttgct
aacctttttgtgtcaaaccctttacagaacccagctgcccatgctgcatcaacttttgca
gcgtcggtttggccgggtggcacatcgacatgtgctgagataggggttccacccagtcaa
gtgagctcaccttcgagtctggcagctatagctgctgctaccgtttcggctgcaactgct
tggtgggctgctcatgggttgctgcctttatgtgctcctattcattctgccttcccctgc
catcctcctccaactactttagctcctatatctgatgataatggccatgctccatatgca
aatgtagacacaaaggaaagtaccctacaaaacccttctgtgcagagtcaagatgcggat
ccagaacactctgaagcatcaaaggctcaatcttcacccttgaaaacaacgttgtcacca
tcatactcggagcagagtggaagcacgaagactgaaactggaggtaagccagcttctcat
gagcagactgaagctgagactgatcaaaacagagctaaaaacagaaaacaagtagaccgc
tcctcctgtggctcgaacacgccctctagtagtgatgctgaggtagatgcatctgagaag
cttgagaaagacaaggatgaggagaaagaagttgaagtagatgtgaacccaccagcagaa
gagtctaacatccgtcgaagtagaagcagtagcaacttaagtgacccatggaaatcggta
tctgatgaggtacttggacagggacgactggcctttcaagctctcttctcaagggaggta
ttgccacaaagctttccaccccgacgtgactccaaggacaagaaggatcttagaggaaac
gaagacggggagaagaagaaaagtgctgaaacagagcatggagaaggacaggaacttgac
ctcaacagaactgctcaagccactgactctgaccatcaggaggagaaaggagaccaggat
ggatatcttgcaattggattgggggcctcaaagctcaaggaaagaaccggtttcaagcct
tacaaaagatgttcagtagatgctaaagagaacaggatcaccaactcgtccactctcaac
cgggttgaacagaaagatcccaaacgaatttgcctggaaagacgagcttaa
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