Thauera sp. K11: CCZ27_00290
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Entry
CCZ27_00290 CDS
T05106
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
thk
Thauera sp. K11
Pathway
thk03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
thk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CCZ27_00290
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
thk03400
]
CCZ27_00290
Enzymes [BR:
thk01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
CCZ27_00290
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
CCZ27_00290
DNA repair and recombination proteins [BR:
thk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CCZ27_00290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
DUF5817
Motif
Other DBs
NCBI-ProteinID:
ATE58607
UniProt:
A0A290ZHW4
LinkDB
All DBs
Position
53938..54756
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AA seq
272 aa
AA seq
DB search
MPELPEVETTRNGVRPHAEGRVLSALVVRNPRLRQPVPDDLPAHIVGARLLAVSRRAKYL
LFDFGGGSVIVHLGMSGSLRVVPAAEPPRAHDHVDFVFGDIALRLRDPRRFGMVLWQAGE
AGRHPLLAHLGPEPLDDAFDAAWLHRATRGLRAPIKHVLMDSRRVVGVGNIYASESLFRA
RVHPMTPAGRLGPQRCGRLVAAVRETLRAAIAAGGSTLRDFVGGDGRPGYFQQQYFVYGR
DGEPCRVCGGEIQRIVSGQRATYFCPRCQPRG
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaattgcccgaagtcgaaaccacccgcaacggcgtgcgtccgcatgccgaaggc
cgggtgctgagcgcactggtggtgcgcaacccgcgcctgcgccagccggtgccggacgac
ctgccggcgcacatcgtcggcgcccggctgctggcggtgtcgcggcgggccaagtacctg
ctgttcgatttcggcggcggcagcgtcatcgtgcacctgggcatgtcgggcagcctgagg
gtggtgcccgccgcggaaccgccgcgggcgcacgaccacgtcgatttcgtgttcggcgac
atcgccctgcgcctgcgcgatccgcggcgcttcgggatggtgctgtggcaggccggggag
gcggggcgccatccgctgctcgcgcatctcgggccggagccgctggacgatgccttcgat
gccgcctggctgcaccgtgcgacgcgcgggctgcgcgcgccgatcaagcacgtgctgatg
gacagccggcgcgtggtgggggtgggcaacatctatgcgtcggaaagcctgttccgcgcc
cgggtccatccgatgacgcccgccggccggctcggcccgcagcgctgcgggcgcctggtg
gcggcggtgcgcgaaaccctgcgcgcggcgatcgccgccggcggcagcacgctgcgcgat
ttcgtcggcggcgacggcaggcccggctatttccagcagcagtatttcgtctatggccgc
gacggcgagccctgccgggtgtgcggcggcgagatccagcgcatcgtcagcgggcagcgc
gccacctatttctgcccgcgctgccagccgcggggttga
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