Thauera sinica: CCZ27_12685
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Entry
CCZ27_12685 CDS
T05106
Name
(GenBank) RNA polymerase subunit sigma
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
thk
Thauera sinica
Pathway
thk02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
thk00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CCZ27_12685
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
thk03021
]
CCZ27_12685
Transcription machinery [BR:
thk03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CCZ27_12685
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
PhyR_sigma-like
Sigma70_ECF
HTH_23
HTH_11
GerE
HTH_28
DUF8666
HTH_VMAP-M9
HTH_Mga
DUF6362
Phage_terminase
Motif
Other DBs
NCBI-ProteinID:
ATE60685
LinkDB
All DBs
Position
complement(2940942..2941454)
Genome browser
AA seq
170 aa
AA seq
DB search
MSSANAPEHVDLLYRDHHGWLLGWLRRKLGCAHDAADLAHDAFLRLLRRPVDLPLREPRA
YLTTIAHGLVVNHWRRLEIERAWLDALMQQPESCQPSPEVRALAIEALLEVDALLSTLPD
KPRRAFLMAQLDGFTYREIATELGVSERMVKKYMAQAMLHCLRAELAPGT
NT seq
513 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcagccaatgccccggaacacgtcgatctcctttatcgggaccatcacggctgg
ctgctgggatggctgcgccgcaagctcggctgcgcgcatgatgccgccgatctcgcgcac
gacgccttcctgcgcctgctgcgccggccggtcgatctgccgctgcgcgaaccccgcgcc
tacctgaccaccatcgcccacggcctggtggtcaaccactggcgccggctggagatcgag
cgcgcctggctcgacgccctgatgcagcagcccgaatcctgccagccctcgcccgaagtc
cgcgcgctggcgatcgaagccctgctcgaagtggatgcgctgctctccacgctgcccgac
aagccgcgccgcgccttcttgatggcccagctcgacggcttcacctaccgcgagatcgcc
accgaactcggcgtctccgaacgcatggtcaagaaatacatggcccaggcaatgctgcac
tgcctgcgcgccgaactggctcccggaacatga
DBGET
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