KEGG   Thauera sinica: CCZ27_12685
Entry
CCZ27_12685       CDS       T05106                                 
Name
(GenBank) RNA polymerase subunit sigma
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
thk  Thauera sinica
Pathway
thk02020  Two-component system
Brite
KEGG Orthology (KO) [BR:thk00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    CCZ27_12685
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:thk03021]
    CCZ27_12685
Transcription machinery [BR:thk03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     CCZ27_12685
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r2 Sigma70_r4 PhyR_sigma-like Sigma70_ECF HTH_23 HTH_11 GerE HTH_28 DUF8666 HTH_VMAP-M9 HTH_Mga DUF6362 Phage_terminase
Other DBs
NCBI-ProteinID: ATE60685
LinkDB
Position
complement(2940942..2941454)
AA seq 170 aa
MSSANAPEHVDLLYRDHHGWLLGWLRRKLGCAHDAADLAHDAFLRLLRRPVDLPLREPRA
YLTTIAHGLVVNHWRRLEIERAWLDALMQQPESCQPSPEVRALAIEALLEVDALLSTLPD
KPRRAFLMAQLDGFTYREIATELGVSERMVKKYMAQAMLHCLRAELAPGT
NT seq 513 nt   +upstreamnt  +downstreamnt
atgtcgtcagccaatgccccggaacacgtcgatctcctttatcgggaccatcacggctgg
ctgctgggatggctgcgccgcaagctcggctgcgcgcatgatgccgccgatctcgcgcac
gacgccttcctgcgcctgctgcgccggccggtcgatctgccgctgcgcgaaccccgcgcc
tacctgaccaccatcgcccacggcctggtggtcaaccactggcgccggctggagatcgag
cgcgcctggctcgacgccctgatgcagcagcccgaatcctgccagccctcgcccgaagtc
cgcgcgctggcgatcgaagccctgctcgaagtggatgcgctgctctccacgctgcccgac
aagccgcgccgcgccttcttgatggcccagctcgacggcttcacctaccgcgagatcgcc
accgaactcggcgtctccgaacgcatggtcaagaaatacatggcccaggcaatgctgcac
tgcctgcgcgccgaactggctcccggaacatga

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