Thauera sinica: CCZ27_20890
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Entry
CCZ27_20890 CDS
T05106
Symbol
selB
Name
(GenBank) selenocysteine-specific translation elongation factor
KO
K03833
selenocysteine-specific elongation factor
Organism
thk
Thauera sinica
Brite
KEGG Orthology (KO) [BR:
thk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
thk03012
]
CCZ27_20890 (selB)
Translation factors [BR:
thk03012
]
Eukaryotic type
Elongation factors
CCZ27_20890 (selB)
Prokaryotic type
CCZ27_20890 (selB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
Beta-barrel_SelB
WHD_2nd_SelB
WHD_3rd_SelB
GTP_EFTU_D2
WHD_2nd_SelB_bact
MMR_HSR1
SRPRB
Motif
Other DBs
NCBI-ProteinID:
ATE62099
LinkDB
All DBs
Position
4777176..4779125
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AA seq
649 aa
AA seq
DB search
MLIGTAGHIDHGKTTLVRALTGVDTDRLPEEKQRGITIELGYAYAPLADGQVLAFIDVPG
HERFVPTMLMGAAGIDYALLVVAADDGVMPQTREHLAILHLLGVGRGAVALTKCDRVPAA
RVAEVAAEVGGLLAPTRLAGSPVFAVSAASGEGVPALSAHLEAVAKAEPQVVPAGGFRLV
VDRRFAIAGAGTIVTGSVHAGTVRIGDRLLLARPSGFSREVRVRGLHVNSRRAEAGGPGS
RCAVNLAGIDYGDIERGDWLLAPALACATDRLDLRLHLLPEAGRRLGQWAGVTLHHAGGH
AMARLALLDGALEAGGLAPGASGLVQAVLDRPVFACHGDRVVIRDAAGRETLGGGRVLDP
FPSARHRRRPERLALLAALEDADPAARLAALLEAAPAGLDADEVAAAHNLPGDGWRALLP
AGAVALPRPANRLLGAAAWARLGDAILARLAAHHADFADEPGVERERLRRMCAPQLPSPA
FQARLEALLADGLIGRAGSAWHLPAHTAELGAADRARADELIARLAAGGFDPPWVRDLAA
ACALAEADVRSLLRRLAMRGEVFQVVRDLFYARGNVAEMQAIAAGLAAGDDRRIRAADFR
DRIGGGRKRAIQILEFFDRVGYTRRVGEGQRRAHVLRGEPPVPADEMPA
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atgctgatcggcacagcaggccacatcgaccatggcaagaccacgctggtgcgcgcgctc
accggcgtcgacaccgaccgcctgcccgaagagaagcagcgcggcatcaccatcgagctg
ggctacgcctacgcgccgctcgcggacgggcaggtgctggccttcatcgacgtgccgggg
cacgagcgcttcgtgcccaccatgctgatgggcgcggcgggcatcgactacgccctgctg
gtggtggccgccgatgacggcgtgatgccgcagacgcgcgagcacctggccatcctgcac
ctgctgggcgtggggcgcggcgcggtggcgctgaccaagtgcgaccgtgtgccggcggcg
cgcgtcgccgaggtcgcggccgaggtcggagggctgctcgcgcccacacggctggccggc
agcccggtgttcgcggtgtcggccgccagcggcgagggcgtccccgcgctgagcgcccat
ctcgaggcggtggcgaaggccgagccgcaagtggtgccggcgggcggtttccgcctggtg
gtggaccgccgtttcgcgatcgccggtgccggcaccatcgtcaccggctcggtgcatgcc
ggcacggtgcgcatcggcgaccgcctgttgctggcgcggccttccggcttctcgcgcgag
gtcagggtgcgcggcctgcatgtgaacagccgccgcgccgaggccggcgggccgggcagc
cgctgcgcggtgaacctcgccggcatcgactacggcgacatcgaacgcggcgactggctg
ctcgcgcccgcgctggcctgcgccaccgaccggctcgatctgcgcctgcacctgctgccg
gaagccggacgcaggctcggccagtgggccggcgtcacgctgcatcatgccggcgggcac
gcgatggcgcggctggcgctgctcgacggcgcgctcgaggccggcgggctggcgccgggc
gcatccgggctggtgcaggcggtgctcgaccgcccggtgttcgcctgccacggcgaccgc
gtcgtcatccgcgatgcagccgggcgcgagacgctgggcggcggccgcgtgctcgacccg
tttccgtccgcgcgccaccggcgccggcccgaacgcctcgcgctgctcgccgcgctggaa
gatgccgaccccgccgcgcggctggccgcactgctggaagccgcgccggccgggctggat
gccgacgaggtggctgccgcgcacaacctgcccggggacggctggcgtgcgctgctgccg
gccggcgcggtggccttgccgcggcctgcgaaccgcctgctcggcgccgccgcgtgggcc
cggctgggcgatgccatccttgcccgcctggcggcgcaccacgccgatttcgccgacgaa
cccggcgtcgagcgcgagcgcctgcgccgcatgtgcgcaccgcaactgccctcgccggcc
ttccaggcgcggctggaagccctgctcgccgacggactcatcggtcgcgccggttcggcc
tggcacctgccggcgcacacggcggaactcggcgccgccgaccgcgcgcgtgccgacgaa
ctgatcgcccggctcgccgccggcggcttcgatccgccgtgggtgcgtgacctcgcggcg
gcctgcgcgctcgccgaagcggacgtgcgcagcctgctgcgccggctggcgatgcgcggc
gaagtgttccaggtggtgcgggatctgttctacgcgcgcggcaacgtggcggagatgcag
gcgatcgccgccggactggctgccggcgatgatcgccgcatccgcgccgcggatttccgc
gaccgcatcggcggcggccgcaagcgcgcgatccagatcctggagttcttcgaccgcgtc
ggatacacgcgccgcgtcggcgaggggcagcgccgcgcccacgtgctgcgcggcgagccg
ccggtgccggcggacgagatgcccgcctga
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