Thauera sp. K11: CCZ27_22380
Help
Entry
CCZ27_22380 CDS
T05106
Name
(GenBank) ribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
thk
Thauera sp. K11
Brite
KEGG Orthology (KO) [BR:
thk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
thk03016
]
CCZ27_22380
Enzymes [BR:
thk01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
CCZ27_22380
Transfer RNA biogenesis [BR:
thk03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
CCZ27_22380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
Motif
Other DBs
NCBI-ProteinID:
ATE62844
UniProt:
A0A290ZUY1
LinkDB
All DBs
Position
complement(5131361..5133259)
Genome browser
AA seq
632 aa
AA seq
DB search
MFVLFEEDGAFKAGTVLADNDATLQVETTHGKRVKLKRANVLLDFREPGPADLLARAEAG
AEDLDLEFLWEVCGDDEFGFAEFAAEYHGHPPSATEAATVLLRLHSAPMWFHRKGKGRFR
KAPADILQAALAGLEKKKQQAAAVEHMRGELINGRMPPELAALLPQALYRPDRNRIEIKA
LEAACVDSGLSAPRLLLKCGALASSYDFHYNRFLFEQFPEGPAFPAFEPAALPAGLPRAE
VAAFSIDDASTTEIDDAFSVTPRAEGGWRIGIHIAAPALGFGRGSTLDAIARHRLSTVYM
PGNKITMLPDEVVYAFTLAEGRDCPAVSLYLDVTPGLAIVGEESRVEMVPIVTNLRHHDI
EPVFNDCTVHEGGPDFPWKRELTVLWDLATVLEAGRGKPAANEDRIDYSFSVDWTRHTAD
GPGHVSIGRRLRGSPMDKLVAELMIHANMTWGRLLDEAGVPGLYRAQGGGKVRMTTVAAP
HEGLGVDCYAWSSSPLRRYVDLVNQWQIISVLHGTEPAFAPRSAELMAALRDFELTYADY
AEFQRQMERYWCVRWLRQHGLGPVEATVLRENVVRLEQIPLVFKVPSMPLQMPGSRVRLQ
VENTDLFDVEVAARFVQILSEPQAPADAEYAG
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atgttcgtgctgttcgaagaggacggggccttcaaggccggaacggtcctcgctgataac
gatgccacgctgcaggtggagacgacccacggcaagcgggtcaagctcaagcgcgcgaac
gtgctgctggatttccgcgagcccggcccggccgatctgctggcccgcgccgaagccggc
gccgaggacctcgacctggaattcctctgggaagtgtgcggcgacgacgagttcggcttt
gccgaattcgccgccgaataccacggccatccgccgtcggcgacggaagcggccaccgtg
ctgctgcgcctgcattcggcgccgatgtggttccaccgcaagggcaaggggcgctttcgc
aaggccccggccgacatcctgcaggcagcgctcgccgggctggaaaagaagaagcagcag
gcggccgcggtcgagcacatgcgcggcgaactgataaacggccgcatgccgccggaactc
gccgcgctgctgccgcaggccctctaccggcccgaccgcaaccgcatcgagatcaaggcg
ctggaagccgcctgcgtggacagcggcctgtcggcgccgcggctgctgctgaagtgcggc
gcactcgcctcgagctacgacttccactacaaccgcttcctgttcgagcagtttcccgag
gggccggccttccccgccttcgagccggcggcgctgcccgccggcctgccgcgcgcggag
gtggccgcgttctcgatcgacgacgcctcgaccaccgagatcgacgacgccttttcggtg
acgccccgcgccgagggcggctggcgcatcggcatccacatcgccgcgccggcgctgggc
ttcggacgcggctccacgctcgacgcgatcgcgcgccaccggctgtccaccgtgtacatg
ccgggcaacaagatcaccatgctgcccgacgaggtggtctacgccttcacgctggccgag
gggcgcgactgcccggcggtgtcgctgtacctcgacgtcacgcccgggctggccatcgtc
ggcgaggaatcccgcgtcgagatggtgcccatcgtcaccaacctgcgccaccacgacatc
gagccggtgttcaacgactgcacggtgcacgagggcggcccggacttcccatggaagcgc
gagctgaccgtgctgtgggatctcgccaccgtgctggaggccggccgcggcaagccggcc
gccaacgaagaccggatcgactacagcttcagcgtcgactggacccggcacaccgccgac
ggccccggccacgtcagcatcggccggcgcctgcgcggctcgccgatggacaagctggtg
gcggaactgatgatccacgccaacatgacgtggggcaggctgctcgacgaggccggcgtg
cccggcctgtaccgcgcccagggcggcggcaaggtgcgcatgaccaccgtcgccgcaccc
cacgaggggctgggcgtggactgctacgcttggtcgagttcgccgctgcggcgctatgtg
gacctcgtcaatcagtggcagatcatctcggtgctgcacggcaccgaacccgccttcgcc
cccaggtcggccgaactgatggccgcgctgcgcgacttcgaactcacctacgccgactac
gccgagttccagcgccagatggaacgctactggtgcgtgcgctggctgcgccagcacggc
ctcggcccggtcgaggccacggtgctgcgcgagaacgtggtgcggctggagcagattccg
ctggtgttcaaggtaccgtcgatgcccctgcagatgcccggcagccgggtgagactgcag
gtggagaacaccgacctgttcgacgtcgaggtggcggcgcgcttcgtgcagatcctgtcc
gagccgcaggcgccggccgacgccgagtacgcgggctga
DBGET
integrated database retrieval system
