Tetragenococcus halophilus NBRC 12172: TEH_00790
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Entry
TEH_00790 CDS
T01640
Symbol
birA
Name
(GenBank) putative transcriptional regulator/biotin protein ligase
KO
K03524
BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:
6.3.4.15
]
Organism
thl
Tetragenococcus halophilus NBRC 12172
Pathway
thl00780
Biotin metabolism
thl01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
thl00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00780 Biotin metabolism
TEH_00790 (birA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
thl03000
]
TEH_00790 (birA)
Enzymes [BR:
thl01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.15 biotin---[biotin carboxyl-carrier protein] ligase
TEH_00790 (birA)
Transcription factors [BR:
thl03000
]
Prokaryotic type
Helix-turn-helix
Other families
TEH_00790 (birA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPL_LplA_LipB
HTH_11
BPL_C
HTH_24
Fe_dep_repress
HTH_AsnC-type
MarR
HTH_36
GntR
TrmB
HTH_DeoR
Motif
Other DBs
NCBI-GeneID:
11258959
NCBI-ProteinID:
BAK93406
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Position
complement(87895..88854)
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AA seq
319 aa
AA seq
DB search
MGSTKQQILTILRQDKGIISGEKLANNLEVSRTAVWKAVRELEKMGYQIEHLPNGYRYLT
SDVLEKELISSQALPTSSIFIKEETNSTMDDAKVAAMAQQPTPALFIAEKQLGGHGRFGR
PFFSPAGQIYMSLLLTPNQTFEELPQYTILAAVAVSLAIDHYTGKQTQIKWVNDIYLDGK
KICGILSEATSDFETGRIKHVILGCGINFSISAQSFPENIQTKAGAIFPQKNFLITRNQL
IQLIWQYFFELLEALPDKEYINIYRKKSFVLGKRVQFKQQGVTYSGKATEISDTGELIVQ
TTQGVKALSSGEISLEAIY
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgggttcaaccaaacaacaaatattaactattctgagacaggataagggaattatctct
ggtgaaaaactagccaacaacttagaagtttctcgtacggctgtttggaaagctgtacga
gaattagaaaaaatgggttatcagattgagcatctccctaatggatatcgctatttaact
tcagacgttcttgaaaaagagttgataagtagccaagctttgccgacgtcctccatcttt
attaaagaagaaactaattcaacaatggatgatgctaaagttgccgctatggcccaacaa
ccaacacccgctcttttcattgcagaaaaacaactaggaggacatggccgttttggtcga
ccatttttttcacctgctggacaaatctatatgagtttattattaacgcccaaccaaact
tttgaagaattaccccaatatacaattttggctgccgttgctgtgagtttagcaatcgac
cattacacggggaaacaaacacaaattaaatgggtgaatgatatttatttagacggaaaa
aaaatctgcggtattttatctgaagcaacaagtgattttgaaactggacgtattaaacat
gtaatcttaggttgtggtattaacttttcaatttctgcccaaagcttccctgaaaatata
cagacaaaagctggcgctatttttcctcaaaaaaactttcttataacacgtaaccaattg
attcaattaatttggcaatacttttttgaattacttgaggctttacctgataaagaatat
atcaatatttatcgtaaaaaatcatttgtattaggtaaaagagtgcagtttaagcaacaa
ggtgtcacttatagcggaaaggccacagaaatctctgatactggagaactgatcgtccag
accacccaaggagttaaagcgctttcttctggtgaaattagtttagaagctatttattaa
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