Tetragenococcus halophilus NBRC 12172: TEH_01440
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Entry
TEH_01440 CDS
T01640
Name
(GenBank) putative 3'-5' exonuclease
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
thl
Tetragenococcus halophilus NBRC 12172
Brite
KEGG Orthology (KO) [BR:
thl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
thl03019
]
TEH_01440
Messenger RNA biogenesis [BR:
thl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
TEH_01440
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_anti-codon
HD
TraI_2
tRNA_anti_2
Motif
Other DBs
NCBI-GeneID:
11259007
NCBI-ProteinID:
BAK93471
UniProt:
A0AAN1SF37
LinkDB
All DBs
Position
164937..165884
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AA seq
315 aa
AA seq
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MKKIRDLVVDEDFQGFVLIKNADVRTAKNGKTFIAFTFQDTSGSIDGKFWDASSEEIQRF
EVGRVVHLTGKREVYQGNPQVRIYKLRLTNPEEPNDPNLFMERAPVKKEAMEEEINQVLF
EITNPHWNRIVRFLLNKYKKEFFEYPAAKKNHHAFVGGLAYHTTTMLHLGKSLVKEYPQL
DGALLFAGIILHDLGKVIELSGAMSTEYTVVGNLVGHLVLVNEEITKACLALKIDESAED
IVVLRHMVLAHHGQLDYGSPVRPRIMEAEILHQIDNIDASMQMLTNAISKTEAGDYTERI
FGMDNRSFYVPKNSE
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaatacgagatttagttgtagacgaagattttcaaggatttgtattaatcaaa
aatgcagacgtacgtactgctaaaaatggaaaaacctttattgcttttaccttccaggat
acttcaggttcaattgatggaaaattttgggatgcctctagtgaagaaatacaacgcttt
gaagttggaagagtggttcacttgactggaaaaagagaagtttaccaaggaaatcctcag
gtaagaatttataaattacgtttaacaaatcctgaagagccaaatgacccaaacttattt
atggaacgtgctcctgtaaaaaaagaggctatggaagaagagatcaatcaagtactcttt
gaaattactaatcctcattggaaccgtattgttcgttttctactaaataaatataaaaaa
gagttttttgaatatcctgcggcaaagaaaaatcatcatgcttttgtcggaggtctagct
tatcatacgacaacgatgttgcacctaggtaaaagtttggtaaaagaatatccgcaatta
gatggcgcattgctttttgctggaattattttacatgacttaggtaaagtgattgaacta
agtggtgctatgtccacagagtatacagtagtgggaaatcttgtaggacatctagtttta
gtaaatgaagaaattactaaagcttgtttggcgctaaaaatcgacgaaagtgcggaagat
attgtggtcttacgtcatatggtgttggctcatcatggtcaattagactatggttctcca
gtgcgacctcgaataatggaagctgaaatcttgcaccaaattgacaatattgatgcatcg
atgcagatgctgacaaatgcaatttctaaaacagaagcaggggattatacagagcgtatt
tttggcatggataatcgtagcttttacgtgcctaaaaattctgaatag
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