Tetragenococcus halophilus NBRC 12172: TEH_06720
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Entry
TEH_06720 CDS
T01640
Symbol
sbcD
Name
(GenBank) nuclease SbcCD subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
thl
Tetragenococcus halophilus NBRC 12172
Brite
KEGG Orthology (KO) [BR:
thl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
thl03400
]
TEH_06720 (sbcD)
DNA repair and recombination proteins [BR:
thl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
TEH_06720 (sbcD)
Archaeal homologous recombinant proteins
TEH_06720 (sbcD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
SbcD_C
Metallophos_2
DUF3114
Motif
Other DBs
NCBI-GeneID:
11261301
NCBI-ProteinID:
BAK93999
UniProt:
A0AAN1SFF3
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All DBs
Position
690991..692127
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AA seq
378 aa
AA seq
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MRFLHTADWHIGKKLHGYDLLVDQKEIIHQILDIALTQQVDAIVIAGDLYDRSVPSVEAC
ELLNQTFIEMNLEKKLPILAISGNHDSAVRLSTGMPWYEQTDFHLYTDLKQSFEPVDIGD
VQFFLLPYFEPIAARLYFEEESLSLQAAIQKIIEKMRTAFDKNKKQVLVTHFFIAGSRRS
DSETAVEVGGLNSISYELVQDFDYVALGHLHSKNALKTQNALYSGSPLKFSLSEKDDSKG
VWIVDSRSVAPEFHELVAKRDVCSLQASFEELTDPSFYQRMDRNCFWYFQLTDRSVITNM
MNQLRAIYPNILGVERVNGRRETKQLEKVQHRKNTPYSMLTSFFEDITGDRLTKKQRDWL
DEGLQRSLDTEKRNDDAT
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
ttgcgatttttacatacagccgattggcatattggaaaaaaacttcatggctacgattta
ttagtcgatcaaaaagagatcattcatcagattttagatattgcacttacacagcaggtg
gacgccattgttattgcaggagatctgtatgatcgaagtgtccctagtgtagaagcctgt
gaattgcttaatcaaacttttattgagatgaatctagaaaaaaagctacctattttggct
atttccggtaatcatgattcggcggttcgcttaagtacgggcatgccatggtacgagcaa
actgattttcatctctatacagatttgaagcagtcttttgaaccggttgacataggagac
gtacaattcttcttattaccttattttgaacccattgcagcgcgtctttattttgaagaa
gaaagtttgtctctacaagctgctattcaaaaaatcatcgagaagatgcggacagctttt
gataaaaataaaaaacaagtacttgtgactcattttttcattgctggcagtaggcgtagt
gattctgaaacagcagtggaagtgggcgggttaaatagtatttcctatgaactggtgcaa
gattttgattatgtagctctagggcatttgcattcaaaaaatgctttaaaaacacaaaat
gcgctttatagtggctcgccattaaaattttcattatccgaaaaagatgattcaaaaggc
gtatggatcgttgatagtcgatcagtagcccctgaatttcatgagctggtagctaaacga
gatgtttgtagtttacaagcttcttttgaagaactaactgatccaagcttttatcagcga
atggatcgtaattgtttttggtattttcagttaacagatcgtagtgtgattacaaatatg
atgaaccaattgcgtgcgatctatcctaatatattaggcgttgaacgagtcaatggacga
cgtgaaacaaaacaactagaaaaagtacaacatcgcaaaaatacgccttacagtatgttg
acttctttttttgaagatattacaggcgatcgtttaaccaaaaagcagcgggattggttg
gatgaaggattacaacgatcactggatacagaaaagaggaacgatgatgcaacctag
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