Tetragenococcus halophilus NBRC 12172: TEH_07060
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Entry
TEH_07060 CDS
T01640
Symbol
dnaX
Name
(GenBank) DNA polymerase III tau subunit
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
thl
Tetragenococcus halophilus NBRC 12172
Pathway
thl03030
DNA replication
thl03430
Mismatch repair
thl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
thl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
TEH_07060 (dnaX)
03430 Mismatch repair
TEH_07060 (dnaX)
03440 Homologous recombination
TEH_07060 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
thl03032
]
TEH_07060 (dnaX)
03400 DNA repair and recombination proteins [BR:
thl03400
]
TEH_07060 (dnaX)
Enzymes [BR:
thl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
TEH_07060 (dnaX)
DNA replication proteins [BR:
thl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
TEH_07060 (dnaX)
DNA repair and recombination proteins [BR:
thl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
TEH_07060 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
AAA
AAA_22
DNA_pol3_gamma3
RuvB_N
AAA_30
AAA_5
AAA_assoc_2
AAA_19
AAA_14
DnaX_C
TIP49
AAA_16
AAA_24
Mg_chelatase
TolA_bind_tri
AAA_7
AAA_28
AAA_18
AAA_2
Rad17
nSTAND3
DUF815
RCF1-5-like_lid
Glyco_tranf_2_5
Sigma54_activ_2
AAA_6
PIF1
RNA_helicase
DUF3573
DUF5320
Viral_helicase1
ACR_tran
Motif
Other DBs
NCBI-GeneID:
11259402
NCBI-ProteinID:
BAK94033
UniProt:
A0AAN1SH05
LinkDB
All DBs
Position
727496..729250
Genome browser
AA seq
584 aa
AA seq
DB search
MANLVYQALYRVWRSQRFDDVIGQEAITQTLKNAITQSQISHAYLFTGPRGTGKTSAAKI
LAKAVNCPNSVDGEPCNECEICRSITDGTQEDVIEIDAASNNGVEEIRLIRERANYAPTQ
AQYKVYIIDEVHMLSTGAFNALLKTLEEPKKNVIFILATTEPHKIPATIISRTQRFDFKR
IDTKDIVDHLAYILEKNELSFEDEALNVIAQAAEGGMRDALSILDQAISFSDDTITLQDA
LEVTGSLTYDMMDRFILTCKQENTAECLSLLDEMLASGKEARRLLENLLVYCRDLLIYQK
APKLLAEKAQHFTATFKQSAEEISAQQIYSWIHILNQTQNEIRFTTSPRIYLEVATVKLS
EGNSTENSSSVDATTQPDDTQELVGLKEQVTALQQEVNQLKNRLEQPQQQVQTKTQQQKE
KKTASTGYRVPKKRVFKVLKEARKKDLVNVKEVWEDLLASLSVTQKAMLRASQPKAASPN
GLVIAFDYEIICKKAANDQDFVLAVQNNISRMISDYVPDLVYITDESWPTLRQEFLSGHK
DEADEDELTEQEESESTTTDEQKEDLAVSKAQDLFGELATIKED
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
gtggcgaatttggtttatcaagcactttatcgcgtatggcgttcgcaacgatttgatgat
gtaattggtcaagaagcaatcactcaaaccttaaaaaacgcgattacgcaaagtcaaatt
tcccatgcttatttgtttacaggaccacgaggcacgggaaaaactagtgctgcaaaaatt
cttgctaaagccgtgaactgtcctaatagtgtagatggggaaccttgtaatgaatgcgaa
atttgtcgttcaattacagacggtactcaagaagatgtgattgaaatcgatgctgctagt
aataacggtgttgaagaaattcgtttgattcgtgagcgggcaaattatgctcccactcag
gctcagtataaagtctatattattgatgaagttcatatgttatctacgggagctttcaat
gctttgttaaaaaccttggaagaacccaaaaaaaatgtgattttcatcttagccacaaca
gaacctcataaaattccagcaaccattatttctagaactcagcgttttgattttaaacga
attgatacaaaagatattgtagatcatttagcatatattttagaaaaaaatgaactcagt
tttgaagatgaagcattaaatgttattgcacaagcagctgaaggcggtatgcgtgatgct
ttaagtattttagatcaagctatttcctttagtgatgataccattacattacaagatgct
ttagaagtaacaggtagtctgacttatgatatgatggaccgttttattttaacttgtaaa
caagaaaatacagcggagtgtttaagtttgttagatgaaatgttagcttcaggcaaggag
gcaaggcggttattagaaaacttactggtttattgtcgtgacttattgatttatcaaaaa
gcacctaaactattagctgaaaaagcccagcattttacagcaacatttaagcaatctgca
gaagaaatttctgcccaacaaatttattcttggattcatattttaaatcagacacaaaat
gaaatacgttttaccacaagtcctagaatatatttagaagttgccactgtaaagttgtct
gaaggaaattctactgaaaatagttcttcggttgatgctactacacagccagatgatact
caagagctagtagggttaaaagagcaagtaactgcattgcaacaggaagttaatcagtta
aagaatcgtttggaacaaccgcaacaacaagtccaaacaaagacacaacagcaaaaagaa
aaaaaaacggcgtctactggttatcgtgtgcctaaaaaacgagtatttaaggttttaaaa
gaggctaggaaaaaagacttagtgaatgtcaaagaagtttgggaggatcttttagcaagt
ttgagtgtaacacaaaaggcgatgctaagagcaagccagcccaaagctgctagtcctaat
ggattggtcattgcttttgattatgaaattatttgtaaaaaagcagcaaacgatcaggat
tttgtattagctgtacaaaataatattagtcgtatgatttcggattatgtaccggattta
gtctacattactgatgaaagttggcctactttacgacaagaatttctttctggtcataaa
gatgaagcagatgaagatgaactgactgaacaggaagaatcagaaagcactacaactgat
gaacaaaaggaagatttagcggtttctaaagcgcaagatttgtttggtgaattagcaact
attaaagaagattag
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