Tetragenococcus halophilus NBRC 12172: TEH_08540
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Entry
TEH_08540 CDS
T01640
Name
(GenBank) hypothetical protein
KO
K24072
positive control factor
Organism
thl
Tetragenococcus halophilus NBRC 12172
Brite
KEGG Orthology (KO) [BR:
thl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
thl03021
]
TEH_08540
Transcription machinery [BR:
thl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
TEH_08540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r4
HTH_10
GerE
HTH_22
HTH_29
HTH_17
HTH_23
Motif
Other DBs
NCBI-GeneID:
11259492
NCBI-ProteinID:
BAK94181
UniProt:
A0AAN1SGL9
LinkDB
All DBs
Position
856435..857013
Genome browser
AA seq
192 aa
AA seq
DB search
MEGKELAQEYANDLKPLRAIYSFLKDRRDNCQRLVTECEEHQAWELAEEFNAEYIDYRQR
CKDIGAIISSSQYSIQWLRTKHEPQGPGVSKLPYTKREVQVDDVDKVLTLQNTFETTYPN
LTEDEIAEVHSFLSMLSERERDVFVSIRGKRNTHSQTARYLGISESAMYSYLRRAEEKID
KKLNSTLQMSLF
NT seq
579 nt
NT seq
+upstream
nt +downstream
nt
atggaaggaaaagaactagcacaagaatatgcaaatgatttgaagccactaagagccatt
tacagttttttaaaagatagacgggataattgccaaagattagttacagagtgcgaagaa
catcaggcgtgggagcttgcagaagaatttaacgctgagtacatagactatcgccaacga
tgtaaagacatcggagcgattatatcaagcagtcaatacagtattcagtggttgcgtact
aaacatgagccacaaggtccgggcgtgagtaagttgccttacacaaagcgagaagtacaa
gtggatgatgtcgataaagtattgacgttgcaaaacacatttgaaaccacctacccgaac
ttaaccgaagacgagattgcagaagtccacagttttctttctatgctgtcggaacgtgaa
agagatgtatttgtatcgattcgaggaaaaagaaacacacacagccaaacagctcgttat
ttgggtatatcagaaagtgctatgtattcttatttgcgaagagcagaagaaaagattgat
aaaaaattaaattcaacactacaaatgagcttattttga
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