Tetragenococcus halophilus NBRC 12172: TEH_11350
Help
Entry
TEH_11350 CDS
T01640
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
thl
Tetragenococcus halophilus NBRC 12172
Pathway
thl03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
thl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
TEH_11350 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
thl03400
]
TEH_11350 (ung)
Enzymes [BR:
thl01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
TEH_11350 (ung)
DNA repair and recombination proteins [BR:
thl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
TEH_11350 (ung)
Prokaryotic type
TEH_11350 (ung)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-GeneID:
11259725
NCBI-ProteinID:
BAK94462
UniProt:
A0AAN1SGI0
LinkDB
All DBs
Position
1125709..1126389
Genome browser
AA seq
226 aa
AA seq
DB search
MKTIINNSWQDILADEFQKPYYKDLREFLKEEYASQKIHPDMYHIFEALQITPYEKVKIV
ILGQDPYHGPNQAHGLSFSVQPGVKVPPSLQNIYKELESDLGISPVDHGYLVPWAKQGVL
LLNTVLTVREGQAYSHRGKGWERLTDKVIEKLNERQDPVIFILWGKPAQKKISMIDTSKH
VIIKSVHPSPLSAHRGFFGSKPFSQANNALIALGKEAIDWRLPQKV
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
atgaagacgatcatcaataatagttggcaagatattttagctgatgagttccaaaagcca
tactataaagatttacgtgaatttttaaaagaagaatatgcgagtcagaaaattcatcct
gatatgtatcatatttttgaggctttacagataacgccttatgaaaaggtgaaaatcgtt
attttaggtcaagatccttatcacggcccaaatcaagcacacggtttatctttttccgtg
cagccgggtgtgaaagtaccaccttctttacaaaatatttataaagaattagaaagtgac
ttaggcatttcgccggtagatcatggatatttagtgccttgggccaaacaaggggtttta
ttattaaatacggttttaaccgtacgagaaggccaagcttattcacaccgaggaaaaggt
tgggaacgtttgaccgataaagtcattgaaaaattaaatgaacgtcaagatcctgtgata
tttattctatggggaaaacctgcacaaaagaagatttctatgatcgacacaagcaaacat
gtgattattaaatctgttcatcctagcccgttatctgctcaccgtggcttttttgggtca
aaacctttttctcaagccaataacgcgcttatcgctttaggtaaagaagctattgattgg
cgattaccacaaaaagtataa
DBGET
integrated database retrieval system
