Tetragenococcus halophilus NBRC 12172: TEH_13160
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Entry
TEH_13160 CDS
T01640
Symbol
addB
Name
(GenBank) ATP-dependent nuclease subunit B
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
thl
Tetragenococcus halophilus NBRC 12172
Brite
KEGG Orthology (KO) [BR:
thl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
thl03400
]
TEH_13160 (addB)
Enzymes [BR:
thl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
TEH_13160 (addB)
DNA repair and recombination proteins [BR:
thl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
TEH_13160 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
Motif
Other DBs
NCBI-GeneID:
11259871
NCBI-ProteinID:
BAK94643
UniProt:
A0AAN1SGL0
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All DBs
Position
1314902..1318459
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AA seq
1185 aa
AA seq
DB search
MSLQFITGDGSCDHEKVVLDTACDWLANDHNEVFFLVPNYNKFEREQEILSQLKHRQEKK
DFSTIRGQVYSFNRLAWYFLQDSENINGQTISDTGSAMIMRKVLLTLSDKLIIFRGEINK
EGFIAKLLELYKEFQLGNITIDMLGFLPSSQETTKAKDFELKMYEIRLIFTAYEKELAKR
NLQIEQPISMLTNFLAASDLQDTAQLNQKLFIVNGFSNFSMQEQELLKVLFDKSHVCIDL
YVDSVHTDSDALDLFFDPKQTYHILKNFAQNQQSHVLFDKKAPLLSNVSASYLELERCFR
QTNHGRYEQAGALSDHVEIWKAENPEEELRQVATEIRRLVSLSFTKGNKPLYYRDIQLLT
LNPELYYSFIPSIFEELDIPFYLDEDRQMKQHPLVEFIQALFALDNYYYRTSDVFRFLRT
ELYIPKQLQEDTQDWQKARDKYRWIVDITENQALAHNFHGADWTREQDWRLFNFDFEKEE
LIDTENTEVLTNQLRNNFRNDIVSFFISLKAADTTKEAIIIFYQFLQKIGVEQQLIYWRE
QEIVWGNLEQARDHEQTWASLMDLLDELVEIYGEDPFDFDLFKEILSSGLENLTFGKVPT
AIDQVQINPLDLTRPLQAKVTFAIGLDETSFPRTVENKSLISTEERQQLNENLQPGQYLK
DQAEETIRKEPFVAYNMLLSASEKLYLSYPKNADSKQNIKMSSYLARILKWTDLTLQDRC
SLDLTCDPHHYVGSYKSLIRQLNSLYRQAQEEKSALSGKWQSLKDLLLMSDYRSLATKVF
ESQVHRNVPVHLSPELAEQLYGKNIYSSISQIETFYDYQYDYFLKFGLGLKEREIYGLNS
AMTGEIFHEALDNFLKAVFQDDLSLTQMSEEQRQLLIDRVLKNIFGQERYAFMEKNARMS
FIRYRLGKTVQHVSWGLKKQAEKTQLTPVQTEVLFGEIAGNQGIPGLEIPLSNGGKLYLR
GKIDRVDTTTIDGKPWLAVMDYKSSAHQFDITDSYYGLAMQLLTYLDIALKDAVELIGKK
DVSGAGAYYFHVYDPILAPKKASEKERLKQYKLDGLFADDPEVFEAFDETLNKSEHSLVF
PIQKDKNEQIKGSVRSKEKFYTIEEMNTLMAHNRKKLKEAAERILSGEIKMNPSYKMKDK
RRATQYSPFRSISLFDPMLEENDYHRIHSLSKEEIMERLKEEKDD
NT seq
3558 nt
NT seq
+upstream
nt +downstream
nt
ttgagtttacaatttataaccggagatggtagttgcgaccatgaaaaagtggtattagat
accgcttgtgactggttagcaaatgatcataatgaagtcttttttttagtccctaactac
aataaatttgaacgtgaacaagaaattttgtcgcaattaaaacatagacaagaaaaaaag
gattttagtacgattcggggacaagtttatagttttaaccgtttagcatggtatttttta
caagatagtgaaaatataaatggacagacaatttcggatacaggctcagctatgattatg
cgtaaagttcttctaactttaagcgataaactgattattttccgtggtgagatcaataag
gaaggttttattgcaaaattacttgaactttataaagaatttcaactaggcaacattaca
attgatatgcttggctttcttcctagcagtcaggaaacaactaaggctaaagattttgaa
cttaagatgtatgaaattagactgatatttaccgcttatgaaaaagaactggctaaaaga
aacttacaaatagaacaaccgatttcgatgttaactaattttttagcagctagtgattta
caggatacagctcagttaaatcaaaagctttttatagtcaatggtttttcgaattttagt
atgcaagaacaagaacttttaaaagtcttatttgacaaaagtcatgtgtgtattgatctg
tatgttgactccgttcatacggatagtgacgctttagatttattttttgatccgaaacaa
acttaccatatcttaaaaaactttgcacaaaatcaacaaagccatgtcttatttgataaa
aaggcccctcttttaagtaacgtgtcagctagttacttagagttagaacgctgtttcaga
cagactaatcatggaagatatgaacaagcaggggctctgagtgatcacgtggaaatttgg
aaagccgagaacccagaagaagagttaagacaagtagcaacagaaattcgacgattagtt
tctctttcatttactaaagggaataagccactttattatcgagatattcagctattaact
ttgaatccggaactatattattctttcattccgtcgatttttgaagaattagatattcct
ttttatttagatgaagatcggcagatgaaacaacaccccttagtagaatttatccaagct
ttatttgctttagataattattattaccggacatctgatgttttccgtttcttgcgcacc
gaactatacataccaaagcaactacaagaagatacacaagattggcaaaaagcacgtgat
aaatatcgttggatagttgatataacggaaaatcaagctttggcacataattttcatggt
gctgactggacacgtgagcaagactggcgtttatttaattttgattttgaaaaagaagaa
cttattgatactgaaaatacagaagtacttacaaatcagcttcgtaataattttcgtaat
gatattgtcagcttttttatcagtttaaaagctgcagatacaacgaaagaagcaattata
atcttttatcaatttttacaaaaaattggtgttgaacagcagttgatctattggcgagaa
caagaaattgtatggggaaatttggagcaagcacgtgatcacgagcaaacatgggcttct
ttgatggacttattagatgaacttgtagaaatctatggggaagatccttttgactttgac
ctttttaaggaaatattatctagcgggttggaaaatcttacatttggtaaagttcccacg
gctattgaccaagtacaaattaacccactagatttaactcgtcctttacaagcaaaagtg
acttttgcaattggtttagacgaaacaagttttcctcgtactgtggaaaataaaagttta
atttccacagaagaaagacaacaattaaacgaaaatttacagccaggacaatatttaaag
gatcaagcagaagaaacgattcgtaaagagccttttgtcgcttataatatgttattgtca
gcttctgaaaaattatatttaagctatcccaaaaatgcagattccaagcaaaatatcaag
atgtcttcttatcttgctcgtatattaaagtggactgatctaacgctgcaagatcgatgt
agcttggatttaacttgtgatccgcatcattacgttggaagctataagagcctaatccgc
caattgaacagcttatatcgtcaagcacaagaggaaaaaagcgctctttccgggaaatgg
caatccttaaaagacttactcttgatgtctgattatcggtcattagcaactaaagtattt
gaaagtcaagtgcatcgtaatgttccagtgcacctctcacctgagttggctgagcagtta
tatgggaaaaatatttatagctcgatttcacaaatagaaactttttatgattatcagtat
gattatttccttaaattcggtttggggctaaaagaaagagaaatttacggtctcaattct
gcgatgactggagaaatcttccatgaggctttagataactttttaaaggctgtttttcaa
gatgacctttcactgacgcaaatgtcagaagaacagcgacaacttttaatcgatcgtgtg
ttaaaaaatatatttggacaagaacgttatgcttttatggaaaaaaatgctcgtatgagt
tttattcgttatcgtttaggcaaaacagtccaacatgtttcctgggggttaaaaaaacag
gctgaaaaaacacaattaacgcctgttcagactgaagtcttatttggagaaattgcagga
aaccaagggattcccggtttagaaatccctttatctaacgggggcaaactttatctaaga
ggaaaaattgatcgtgtcgacacaacgactattgatggaaaaccttggcttgcggtgatg
gactataaatcaagcgctcatcagtttgatattaccgatagttactatggtcttgccatg
caactgctcacttatttagatattgctttaaaagatgctgttgaactcataggcaaaaaa
gatgtaagtggtgctggtgcttattacttccatgtttacgatcctattctggcccctaaa
aaagctagtgaaaaggaacgcttgaagcaatacaagcttgatgggctttttgcagatgac
ccggaagtgtttgaagcttttgatgaaacgcttaataagtccgaacattcactagtattt
cctattcaaaaagataaaaatgagcaaataaaaggctctgttagaagtaaagaaaagttt
tatactatagaagagatgaacacgctgatggcacacaatcgcaagaagttaaaagaagcg
gctgaaagaatactttctggtgaaattaaaatgaatccttcttataagatgaaagataaa
aggcgagcaacacaatattctccgtttcgtagtatctctttatttgatccgatgttagaa
gaaaatgactatcatcgcattcattccttatcaaaagaagaaattatggaacgcttaaag
gaggaaaaagatgactga
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